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PLM3_127_b2_sep16_scaffold_12488_3

Organism: PLM3_127_b2_sep16_Eisenbacteria_70_8

partial RP 40 / 55 MC: 3 BSCG 38 / 51 MC: 2 ASCG 9 / 38
Location: comp(1303..2046)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-54-dependent transcriptional response regulator Tax=Geobacter RepID=Q39Y76_GEOMG bin=16ft_combo_ws3_JS1 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 78.5
  • Coverage: 247.0
  • Bit_score: 394
  • Evalue 5.70e-107
Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 45.8
  • Coverage: 236.0
  • Bit_score: 220
  • Evalue 4.20e-55
Tax=RBG_16_RIF_WS3X_71_46_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 78.5
  • Coverage: 247.0
  • Bit_score: 394
  • Evalue 8.00e-107

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Taxonomy

RBG_16_RIF_WS3X_71_46_curated → RIF-WS3X → Bacteria

Sequences

DNA sequence
Length: 744
ATGGGACTCATGGAGCTGGCCAACGACGGCACCCTGTTCCTGGATGAGATCGGGGAGATGAGCCCGATGCTCCAGGTGAAGCTGCTGCGCGTGCTCGAGCGCCGCACGTTCAAGCGCGTGGGCGGCACCAAGGACATCACTGTCGACCTGCGCATCATCTCGGCGACCAACCAGGACCTGGAGCGCATGGTCCGGGAGGGGACCTTCCGCGAGGACCTCTACTACCGGCTCAAGGTGGTGCCGCTCTGGGTGCCACCGCTGCGCGACCGCCGGGACGACATCATTCCGCTCTCGCGGCTGTTCATGGACCGCTTCGCACGGCAGTTCAAGAAACCCTTCAAGGACATCTCGCCGGCCGCCGAGCAGGTGCTCTGCGGATACCCGTGGCCGGGCAACATCCGCGAGCTGCGCAACATGTTCGAGCGCACGGTGCTGCTCGAGCAGGGGGAGGTCCTCGAGCCGTACCACCTCAAGCTGTCGCTGCGTGCCCGCCCGAGCGACGATGAGACCATCGGACAGCGCATCGACACTTACCTGAGCGGGACGCCCACCGATGGCGCCATCCCGTTCGAGCCTTTGATCGAGGAGCTGGAGCGCGCCTTGATTCTGCGCGCCTCCTATGCTACCAAGTGGAATCAAAGTCGCACCGCCGAGATGCTCAATCTCAAGCGTGACAAGCTCCGCTACCGGATGAAGCTCTATGAACTCCAACCCGAAGACGGAGCTCCGACCTCTCAAGACTAG
PROTEIN sequence
Length: 248
MGLMELANDGTLFLDEIGEMSPMLQVKLLRVLERRTFKRVGGTKDITVDLRIISATNQDLERMVREGTFREDLYYRLKVVPLWVPPLRDRRDDIIPLSRLFMDRFARQFKKPFKDISPAAEQVLCGYPWPGNIRELRNMFERTVLLEQGEVLEPYHLKLSLRARPSDDETIGQRIDTYLSGTPTDGAIPFEPLIEELERALILRASYATKWNQSRTAEMLNLKRDKLRYRMKLYELQPEDGAPTSQD*