ggKbase home page

PLM3_127_b2_sep16_scaffold_12488_9

Organism: PLM3_127_b2_sep16_Eisenbacteria_70_8

partial RP 40 / 55 MC: 3 BSCG 38 / 51 MC: 2 ASCG 9 / 38
Location: comp(7828..8841)

Top 3 Functional Annotations

Value Algorithm Source
Diguanylate cyclase with GAF sensor Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LR80_ACIC1 bin=16ft_combo_ws3_JS1 species=Acidothermus cellulolyticus genus=Acidothermus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 56.2
  • Coverage: 336.0
  • Bit_score: 370
  • Evalue 9.20e-100
GAF sensor-containing diguanylate cyclase similarity KEGG
DB: KEGG
  • Identity: 37.2
  • Coverage: 341.0
  • Bit_score: 179
  • Evalue 8.50e-43
Tax=RBG_16_RIF_WS3X_71_46_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 56.2
  • Coverage: 336.0
  • Bit_score: 370
  • Evalue 1.30e-99

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_RIF_WS3X_71_46_curated → RIF-WS3X → Bacteria

Sequences

DNA sequence
Length: 1014
ATGCTCTCGCGCGAAAAGATCCTCGAGTCGCTGTTGGAACTTTCCGGCCGTTCGGCGACGCGTTCGCGTCCCGAGCTGCTGGGGACGGTCCTGCGTTCCGCGATGGCGCTTACGGAGAGCGAGGGGAGCGTGGCGGTGGTCTCGCCCGGGCGTCACCCCGAGCGTTTCACCCTGCGGTCGGGACTGGGCGAACCCGAAGTCACCACGATCCCTCGCGTCAACGGCGACACCACCCGCCTGATGCCGCTCCACGGCAAGCCGGTTCTGGTCGCCGACGTAGCCGCGGCCGGCCGCGTGGGAGCGGACGATCGCTGCCCAGGGGTCGAGGCGGGCCCCGCGGTCTACGTGCCGCTGCGGCTGCGCGATCAGATGCCGGGCTACCTCGCGGTGTTCCGCCGGCGGGGGGCTCCAACCTATGGGGCGGAGGACGTCCGGCTGCTGACCCTGCTCGCGGCATGGACCGCGATGGCGCTCGAGAATCTGCGCCTCGCCCAGAACGTCGAGAAGCTCGCGGTGACCGACGACCTGACCCAGGTCTACAACTACCGTTTCCTCAAGAGCGCGCTCCGCCGGGAGATCAAGCGCGCGGGACGCTACCATCAGGATCTCTCGCTGATCATGATCGACGTGGACAACCTCAAGGCCTACAACGACCGCCATGGCCACCTGCGTGGGAGCTTCCTGCTGCGCGAGATGGCGGGGTTGTTCTCGGCCCACGTGCGCTCGTGGGACCTGGTCGCGAAATACGGCGGCGACGAGTTCACGGTCATCCTCCCGCAGACCGAACTGGCCGGCGCCCGCACGGTCGCCGAGCGACTGCGCAGCGCGGTCGAAGCGCACACCTTCCCACTCGCCACCCCCGGGCAGATCACCGTCAGCATCGGCCTCGCGGCGTTCCCCGGCGACGGCCAGACGACCAGCGCCCTGATCGAGACCGCGGACCGCGCGCTCTACCTGGCGAAGCAGCGCGGGCGCAACCAAGCGGGATACGTGGAGCGGGAAGCAGCTGCGTAG
PROTEIN sequence
Length: 338
MLSREKILESLLELSGRSATRSRPELLGTVLRSAMALTESEGSVAVVSPGRHPERFTLRSGLGEPEVTTIPRVNGDTTRLMPLHGKPVLVADVAAAGRVGADDRCPGVEAGPAVYVPLRLRDQMPGYLAVFRRRGAPTYGAEDVRLLTLLAAWTAMALENLRLAQNVEKLAVTDDLTQVYNYRFLKSALRREIKRAGRYHQDLSLIMIDVDNLKAYNDRHGHLRGSFLLREMAGLFSAHVRSWDLVAKYGGDEFTVILPQTELAGARTVAERLRSAVEAHTFPLATPGQITVSIGLAAFPGDGQTTSALIETADRALYLAKQRGRNQAGYVEREAAA*