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PLM3_127_b2_sep16_scaffold_19604_1

Organism: PLM3_127_b2_sep16_Eisenbacteria_70_8

partial RP 40 / 55 MC: 3 BSCG 38 / 51 MC: 2 ASCG 9 / 38
Location: 16..1395

Top 3 Functional Annotations

Value Algorithm Source
Type IV pilus secretin PilQ Tax=Holophaga foetida DSM 6591 RepID=H1P0D9_9BACT bin=16ft_combo_ws3_JS1 species=Holophaga foetida genus=Holophaga taxon_order=Holophagales taxon_class=Holophagae phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 68.8
  • Coverage: 459.0
  • Bit_score: 612
  • Evalue 2.50e-172
pilQ; secretion system protein similarity KEGG
DB: KEGG
  • Identity: 32.2
  • Coverage: 479.0
  • Bit_score: 235
  • Evalue 1.80e-59
Tax=RBG_16_RIF_WS3X_71_46_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 68.8
  • Coverage: 459.0
  • Bit_score: 612
  • Evalue 3.50e-172

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Taxonomy

RBG_16_RIF_WS3X_71_46_curated → RIF-WS3X → Bacteria

Sequences

DNA sequence
Length: 1380
ATGCGAATCGGTAAGGCCTCCATAGGCCCCATCCTGGCGATCGGCGGTTGCCTGGCCATGCTGCTGGCGCAGCCGGTGGCCGCGCAGGAGTCCACCGCGATGAGGCAGGTGGGCATGGTGCGGACCGGCGCGGGCACGTTCACGATGGACGTCGAGGGGGCGGATGTTCGCACCGTCCTGCGCGCCATCGCCGAGTTCAGCGGTCGAAACATCGTCCCCGGCAAGGATGTCAAAGGCACGGTCAAGGTCTCCCTGCGCAACGTGACGTGGCAGGACGCGTTGCGGACCATCCTGCGCAGCAACGGTCTCGACTCGACCGACGAGGGCGGCATCCTGCGCGTGGACGACGCCGCCAAGTTGAACGCAGAAGCGCTCGAGCGTGAATCGGCGCGCGCCAAGCAGCTCGAGCTCCTGCCGCTCGAGACCGCCATCATCAAGCTCAACTATGCGAATGCGAGCGAGATCAGCGCCGCCCTGCAGTCGTCGGTGAGCCGTCGTGGTCAGATCCAGGTGGACAAGCGCACCAACTCGCTGATCGTCACCGACATGGCGGGCAACATCGAGACGGTCACGCGGATGTCGCAGGCGCTCGACTCGACCACGCCGCAGATCGAAATCACGGCCAAGCTGGTGGACGTGGACGCCGAAGCGCTGCGCGGCTTCGGGATCGAGTGGAACATCTCCCCCTCCGTCCCCGAGTTCTGGGCGCAGGTGGACAAGGACGGGGACGGCGCGGAGGACGATGGGCTGCCGGGCGGCGGGCCGATTCACAACGCCGACGGCTCGCTTCAGGTGGCCGGGCAGCAGGAAACACCGATCGCGAACCCCGCGAACCGGCTGACCTTCGGTATCTTCAAGGACTGGGCGTCGATCGAGGCCCAGCTCCAGGTGCTGGAACAGAGCCGCAAGGCCAACATCATCTCCAACCCTCGCGTGACCACGGTGGACAACCGCGAGGCGAAGATCCTGGTCGGCCAGAAGATCCCGCTCATTGTCCAGGACGTGGCGGGCAACCCGGTCTCTCAGCTCCAGACCATCGGCATCCAGCTCAAGGTCACGCCGCACCTCACGCAGGACAAGAAGATCGTGATGGACCTGCACCCCGAGGTCAGCGACCTGTCGACCCAGAGCACGGTGCAGGGCGGTGTCATCATCAACACGTCCGAGGCGGACACGCGCGTCATGGTGGACGACGGGCAGACCGCGGTGATCGGCGGCCTGATCCGCACCAACGACTCGCACGTGCGGCGCGGTATCCCGTTGCTCAAGGACATCCCGCTCCTCGGCGTGCTGTTCCGCTCCGATAACGTGATCAAGCAGAACCGCGAGCTCATCATCTTCGTGACTCCGCGGATCGTCTCGGACATCGCGAGCAAGTAG
PROTEIN sequence
Length: 460
MRIGKASIGPILAIGGCLAMLLAQPVAAQESTAMRQVGMVRTGAGTFTMDVEGADVRTVLRAIAEFSGRNIVPGKDVKGTVKVSLRNVTWQDALRTILRSNGLDSTDEGGILRVDDAAKLNAEALERESARAKQLELLPLETAIIKLNYANASEISAALQSSVSRRGQIQVDKRTNSLIVTDMAGNIETVTRMSQALDSTTPQIEITAKLVDVDAEALRGFGIEWNISPSVPEFWAQVDKDGDGAEDDGLPGGGPIHNADGSLQVAGQQETPIANPANRLTFGIFKDWASIEAQLQVLEQSRKANIISNPRVTTVDNREAKILVGQKIPLIVQDVAGNPVSQLQTIGIQLKVTPHLTQDKKIVMDLHPEVSDLSTQSTVQGGVIINTSEADTRVMVDDGQTAVIGGLIRTNDSHVRRGIPLLKDIPLLGVLFRSDNVIKQNRELIIFVTPRIVSDIASK*