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PLM3_127_b2_sep16_scaffold_30342_7

Organism: PLM3_127_b2_sep16_Eisenbacteria_70_8

partial RP 40 / 55 MC: 3 BSCG 38 / 51 MC: 2 ASCG 9 / 38
Location: comp(5660..6109)

Top 3 Functional Annotations

Value Algorithm Source
C4-dicarboxylate transport transcriptional regulatory protein DctD bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Rhizobium tropici genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin similarity UNIREF
DB: UNIREF100
  • Identity: 45.7
  • Coverage: 140.0
  • Bit_score: 109
  • Evalue 1.70e-21
two-component, sigma-54 specific, transcriptional regulator, Fis family similarity KEGG
DB: KEGG
  • Identity: 32.5
  • Coverage: 157.0
  • Bit_score: 60
  • Evalue 3.30e-07
Tax=RBG_16_RIF_WS3X_71_46_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 45.7
  • Coverage: 140.0
  • Bit_score: 110
  • Evalue 1.40e-21

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Taxonomy

RBG_16_RIF_WS3X_71_46_curated → RIF-WS3X → Bacteria

Sequences

DNA sequence
Length: 450
GTGCTGATCATCGGGGGCACGGTGGTCCAGCGGGATCGGGTCGCCCGCACGTTTCATCGCGAAAGCCCGCTCCGGGCGGGTCCCTTTGTCGGCGTGGACTGCGCGGCCGATCAGGACCGGCTTCGGATCGCGCTGCGTGCGTGGACGGCGGCGGGGAGTTCATCCGCGACGAACCCGTTCCGGGAAGCCGAGGAAGGCACCCTGTATCTGGAGCGGGTCGAATCCGTACCGCCCGACACGCAACCGTTGCTGCTCGCGCTTGCACTCCGGCTTCAGGGGGAACTGGTCGGCGGGGATGGATGGCCATGTGCCGGGCGACTGGTGGCGGGGAATCCGCACCCGCTGACGGTGGCGATGTCGGAGGGTCGCTTCGATCCGGCCCTTCACGACGCCCTCGACAAGGTGCGCGTCGATCTCGGCCCCGACGTGGCCACCGTGGGTAGTGGCTAG
PROTEIN sequence
Length: 150
VLIIGGTVVQRDRVARTFHRESPLRAGPFVGVDCAADQDRLRIALRAWTAAGSSSATNPFREAEEGTLYLERVESVPPDTQPLLLALALRLQGELVGGDGWPCAGRLVAGNPHPLTVAMSEGRFDPALHDALDKVRVDLGPDVATVGSG*