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PLM3_127_b2_sep16_scaffold_42452_1

Organism: PLM3_127_b2_sep16_Eisenbacteria_70_8

partial RP 40 / 55 MC: 3 BSCG 38 / 51 MC: 2 ASCG 9 / 38
Location: comp(1..423)

Top 3 Functional Annotations

Value Algorithm Source
rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin similarity UNIREF
DB: UNIREF100
  • Identity: 74.8
  • Coverage: 131.0
  • Bit_score: 197
  • Evalue 5.80e-48
rpoD; RNA polymerase sigma factor RpoD similarity KEGG
DB: KEGG
  • Identity: 40.5
  • Coverage: 148.0
  • Bit_score: 95
  • Evalue 1.20e-17
Tax=RBG_16_RIF_WS3X_71_46_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 74.8
  • Coverage: 131.0
  • Bit_score: 197
  • Evalue 8.20e-48

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Taxonomy

RBG_16_RIF_WS3X_71_46_curated → RIF-WS3X → Bacteria

Sequences

DNA sequence
Length: 423
ATGGCGGTGAGCACCAGTCGGGTGAAGAAGACCAGCGCAAAAGAGGCTCGGGCCAAGGAGGCGGTGGCCAAGCGGCGGCTGCTCGACGAGATCAAGTCGGTGGCGCTGCGCCAGGGCTACCTGACCGAGGATCAGATCGTCTGGCAGCTCGGAGAGGAGATGGAGCCCGAAGTGCAGGTGGATCTCATGGAGGAGATTCACGGCATGCTGAGCCAGATGCGCATCGAGGTCTTCGAAACCGAGGAGGAGGCCCAGGAGCGCATCAAGAAGCTTCGCAAGATCGAGGAGAAGAAACCCTCGGCTGCGGCCAAGGCGGCGCCCCAGCAGCCGGTCCGCTACGACGACCCGGTGCGCATGTACCTGCGGGAGATGGGGCGGGTGCCGCTCCTCACGCGCGAGGGCGAGGTCGAGATCGCCCGCCGC
PROTEIN sequence
Length: 141
MAVSTSRVKKTSAKEARAKEAVAKRRLLDEIKSVALRQGYLTEDQIVWQLGEEMEPEVQVDLMEEIHGMLSQMRIEVFETEEEAQERIKKLRKIEEKKPSAAAKAAPQQPVRYDDPVRMYLREMGRVPLLTREGEVEIARR