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PLM3_127_b2_sep16_scaffold_29651_1

Organism: PLM3_127_b2_sep16_Nitrospirae_58_30

near complete RP 40 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: comp(26..400)

Top 3 Functional Annotations

Value Algorithm Source
Response regulator receiver protein Tax=Pedosphaera parvula Ellin514 RepID=B9XIN4_9BACT bin=16ft_combo_ws3_JS1 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 47.9
  • Coverage: 121.0
  • Bit_score: 115
  • Evalue 3.40e-23
response regulator receiver sensor signal transduction histidine kinase similarity KEGG
DB: KEGG
  • Identity: 42.4
  • Coverage: 118.0
  • Bit_score: 94
  • Evalue 2.30e-17
Tax=RBG_16_RIF_WS3X_71_46_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 47.9
  • Coverage: 121.0
  • Bit_score: 115
  • Evalue 4.70e-23

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Taxonomy

RBG_16_RIF_WS3X_71_46_curated → RIF-WS3X → Bacteria

Sequences

DNA sequence
Length: 375
GTGGAGGCGAAGATTCTCGTCGTCGACGATGGGATCGATAGCTGGACTTTACTCAGCTCGATTTTACGCACCCATCACTATCAGCCTATTTGGGCGGCTGACGGTGTCCAGGCTCTGAGCGAGGCCCGAAAGCACCAGCCTCACGTCATTCTGTTGGATCTTGGTCTGCCGGGTGTAGACGGCTTTGTCGTACTCGAACGACTGAAGAGTCACCGGCTGCTGTCGGCCATTCCAGTGATTGTGGTGACGGCACAAGACCCAGCGGTGGCGGAGCAAAAGGCACGGAAGTGCGGAGCGGTTGCATTCCTCCAGAAGCCCGTGAAGGCGGACGAATTGATCGCGACCATCCAAGGAGTTCTTGGTAAGCAAGAGTGA
PROTEIN sequence
Length: 125
VEAKILVVDDGIDSWTLLSSILRTHHYQPIWAADGVQALSEARKHQPHVILLDLGLPGVDGFVVLERLKSHRLLSAIPVIVVTAQDPAVAEQKARKCGAVAFLQKPVKADELIATIQGVLGKQE*