ggKbase home page

PLM3_127_b2_sep16_scaffold_34544_4

Organism: PLM3_127_b2_sep16_Nitrospirae_58_30

near complete RP 40 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: 2923..3792

Top 3 Functional Annotations

Value Algorithm Source
Sigma-54 dependent transcriptional regulator Tax=Candidatus Nitrospira defluvii RepID=D8PI86_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 72.4
  • Coverage: 290.0
  • Bit_score: 417
  • Evalue 7.40e-114
sigma-54 dependent transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 72.4
  • Coverage: 290.0
  • Bit_score: 417
  • Evalue 2.10e-114
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 75.2
  • Coverage: 290.0
  • Bit_score: 428
  • Evalue 5.90e-117

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Nitrospirae_62_14 → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 870
ATGAAGGGGCTCAGGATCCTGCTCGTCGATGACGAGCCGCTGATGCGGCTTTCGATGGTCGATGCGTTGGAGGCGATCGGCCATGACGTCGAAGCGGCCGCATCCGGGACGGACGGTATCGAAGCCATCCGCCAACGGCCATTCGATCTGGTGATCACCGATCTGCGGCTACCCGGCGCGGATGGGCTCGCGGTGCTCACAGCGGCCAAAGAGCAGTCGCCCCACACGGAGGTCGTGGTGATTACCGCCCACGGATCGGTGGAAACGGCGGTCGGCGCGATGAAGCTCGGTGCCTTCGATTACATTACGAAACCGTTTCAGATGGACGAATTGCTGTTGATCGTCGAGCGGGTGGGCCGCGTCGTGACCTTGCGGCGCGAGAATCAAGATCTCAAAGCGGTGCTGGAAGATAAGTTCAGTTTCGGGGGGATTCTCGGGGCGAACAACCAGATGCGAGCCGTACTCGAGAAGATCAAGCTGGTGGCAGGAACGGATTCGACGATTCTGATTCTTGGAGAGAGCGGAACCGGCAAGGAGCTGGTTGCCAATGCCATCCATCAAAACAGCGCCCGAAGCCACTACCCTTTGATCAAAGTCAGCTGTGCCGCGCTTCCGGAAACCTTATTGGAAGCGGAACTCTTCGGCCATGAGAAAGGGGCGTTCACGGGGGCGTTGCGGCAGCGGCGTGGGCGGTTTGAGCTGGCACATCGAGGCACGTTGTTCCTCGATGAAATCGGGGAAATCTCACCGGTCGTTCAAGTGAAATTGTTGCGGGTGCTCCAGGAACGGCAGTTTGAGCGCGTCGGGGGGAACGACAGGATTGATGTCGATGTGCGCCTGGTTTGTGCCACCCAGAAGGATCTTCGAAAG
PROTEIN sequence
Length: 290
MKGLRILLVDDEPLMRLSMVDALEAIGHDVEAAASGTDGIEAIRQRPFDLVITDLRLPGADGLAVLTAAKEQSPHTEVVVITAHGSVETAVGAMKLGAFDYITKPFQMDELLLIVERVGRVVTLRRENQDLKAVLEDKFSFGGILGANNQMRAVLEKIKLVAGTDSTILILGESGTGKELVANAIHQNSARSHYPLIKVSCAALPETLLEAELFGHEKGAFTGALRQRRGRFELAHRGTLFLDEIGEISPVVQVKLLRVLQERQFERVGGNDRIDVDVRLVCATQKDLRK