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PLM3_127_b2_sep16_scaffold_40644_2

Organism: PLM3_127_b2_sep16_Nitrospirae_58_30

near complete RP 40 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: 738..1706

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor Tax=Candidatus Nitrospira defluvii RepID=D8PCP3_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 76.1
  • Coverage: 306.0
  • Bit_score: 461
  • Evalue 5.00e-127
rpoS; RNA polymerase, sigma S (sigma 38) factor similarity KEGG
DB: KEGG
  • Identity: 76.1
  • Coverage: 306.0
  • Bit_score: 461
  • Evalue 1.40e-127
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.1
  • Coverage: 306.0
  • Bit_score: 461
  • Evalue 7.00e-127

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Taxonomy

Candidatus Nitrospira defluvii → Nitrospira → Nitrospirales → Nitrospira → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 969
ATGGCGCGAGGAAGCGAGGAGTTACACGATCTGGGCGAAGCGCGCCGACACGTCGGCGACCATGACGACGAGGGCACCGTCGCGTCGTCGGGTGTGGACGAGTCGCCCATCGGCGAGGAAAAGCCGAGTCGCCGCTCCGAAGGATTGGATACCCTCAAGTGCTATCTGCGCGAAATCCGTCACTCGACCTTGCTGACGTTTAAGCAAGAGCAGCAACTGGGCAAGCGGGTCATGGCGGGGGACGAGCAGGCGCGCCAAGAGATGATCGAATCGAATCTCCGTCTGGTGATCAGTATCGGTAAGCGATATATGCATCGAGGGTTCCCCTTTTCCGATGTCATCGAAGAGGGCAATCTTGGGCTTATCAAGGCCGTCGAAAAATTCAACTATAAGCGCGGGTTTCGCTTCAGCACGTATGCGTCCTGGTGGATCCGGCAGTACATTGAACGAGCGATTATCAATCAGGGAAAGCTCGTGCGGTTGCCGGTGCATGTGGTAGAGCGGCTGAATCGTTATCTCGCCAAGGTGGAGCAGCTCGTTCAGGAACTCGGACGAGAACCGACTGCGTCGGAAGTAGCGGCACGGATGAAGACGACGGACGAAACGGTGTTGGATCTCAAGCAAGTGGTCCGCACGACCTGTTCGTTGGACAGTCCGATCAATGAGGGGGGGGATACGTTCTTGCGCGATGTGATCGAGGACCCTTCGTGTGTCTCGCCTGCCGATACGGCCGAGGGGGTGATGCGTCGGGCGGAGATGATGGAGTGGGTGCAGGAGTTGCCTGAGAAGGAGCAAACTGTTATTATGTCGCGGTTTGGGCTCGATGGGAGTGAGGCCAAGACGTTGGAAGAAATCGGCCGGGAGATGGGGTTGACCCGCGAGCGGGTCCGGCAGATTGAAATGGCCGCCTTGGCGCGTTTGCGCCATACCATTGAACGCAGAACCATGACACAAGCCGACTTGCTCTGA
PROTEIN sequence
Length: 323
MARGSEELHDLGEARRHVGDHDDEGTVASSGVDESPIGEEKPSRRSEGLDTLKCYLREIRHSTLLTFKQEQQLGKRVMAGDEQARQEMIESNLRLVISIGKRYMHRGFPFSDVIEEGNLGLIKAVEKFNYKRGFRFSTYASWWIRQYIERAIINQGKLVRLPVHVVERLNRYLAKVEQLVQELGREPTASEVAARMKTTDETVLDLKQVVRTTCSLDSPINEGGDTFLRDVIEDPSCVSPADTAEGVMRRAEMMEWVQELPEKEQTVIMSRFGLDGSEAKTLEEIGREMGLTRERVRQIEMAALARLRHTIERRTMTQADLL*