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PLM3_127_b2_sep16_scaffold_8666_5

Organism: PLM3_127_b2_sep16_Gemmatimonadetes_65_17

near complete RP 42 / 55 MC: 1 BSCG 43 / 51 MC: 1 ASCG 11 / 38 MC: 2
Location: comp(4237..5130)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y4_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 74.5
  • Coverage: 298.0
  • Bit_score: 433
  • Evalue 1.00e-118
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 74.5
  • Coverage: 298.0
  • Bit_score: 433
  • Evalue 2.90e-119
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 77.8
  • Coverage: 297.0
  • Bit_score: 457
  • Evalue 1.20e-125

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 894
ATGACCGTTGTCCGTACCGGGAAAGCCCGGCCGTTTGCCCGCTCCACTCCTTCCGGCGCGTTCGATCAATACCTGCTCGATATCCAGAAGCTTCCCATGATCTCCGATCCGGACGAGGAGAAGCGTTTGGCCAGAAGTGCCCTAGCCGGCGATGAGAGGGCCGCTGAGCGACTGGTCACCGCCAACCTGCGGTTCGTGATCTCGTATGTGAAGAAGTACCAGGGACACGGGCTCGACCTCTCCGAGCTGGTGGCGATCGGGAACGAGGGCCTGCTCAAGGCGGTCAAGAAGTTCGATCCCGACCACGGGGTGAAGTTCATCTCCTATGCCGTGTGGTGGGTACGCCAGGCAGTGCTGAAGGCCCTGGCCGAGCAGACTCGCAGCGTACGAATCCCGTTGAACCAGAACTCGGCCCTGGTTCGCATGTCCAGGGCAAAGAGCTTCTTGGCTCAGGAGCTCGGGAGGGAGCCAACCGACGCCGAGATCGCGATTGCGCTCAACGACAGCGTCGACAACATCCGCTCGGCTCACCGGATGACGTCGACCGAAGTCTCGCTCGATGCGCCGGTAGAGCGACAGGACCGGGGGGCCAGCACCTTTGGCGAGCGGGTAGCCGGCACCGGTGGCATCGAGATCGAGGAGATGACTGACGTTCGTCTGCAGCGCGAGTTCATCGACCGGATTTTCCAGCGACACCTCACTCCCCGCGAACGCAAGATTCTCTCCCTTTACTACGGGCTCGAGGAAGGATCCGAGGCGCTCACGCTGGAAAAGATCGGCGCTCTCCTGGGCGTCACCCGCGAGCGCATCCGGCAGATCCGGGAGCGTGCCTTCGAGAAGCTGCGTGATTCTCCGGATGTCCGGTCGCTCAGGGGGTTCTGGGGCGCGGCCTGA
PROTEIN sequence
Length: 298
MTVVRTGKARPFARSTPSGAFDQYLLDIQKLPMISDPDEEKRLARSALAGDERAAERLVTANLRFVISYVKKYQGHGLDLSELVAIGNEGLLKAVKKFDPDHGVKFISYAVWWVRQAVLKALAEQTRSVRIPLNQNSALVRMSRAKSFLAQELGREPTDAEIAIALNDSVDNIRSAHRMTSTEVSLDAPVERQDRGASTFGERVAGTGGIEIEEMTDVRLQREFIDRIFQRHLTPRERKILSLYYGLEEGSEALTLEKIGALLGVTRERIRQIRERAFEKLRDSPDVRSLRGFWGAA*