ggKbase home page

PLM3_127_b2_sep16_scaffold_8134_1

Organism: PLM3_127_b2_sep16_Rokubacteria_68_9

near complete RP 42 / 55 MC: 4 BSCG 41 / 51 MC: 3 ASCG 13 / 38 MC: 3
Location: 2..601

Top 3 Functional Annotations

Value Algorithm Source
PDZ/DHR/GLGF domain-containing protein bin=bin7_NC10_sister species=Methylobacterium populi genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 69.4
  • Coverage: 196.0
  • Bit_score: 286
  • Evalue 1.80e-74
PDZ domain family protein similarity KEGG
DB: KEGG
  • Identity: 35.0
  • Coverage: 203.0
  • Bit_score: 120
  • Evalue 4.70e-25
Tax=CSP1_6_Rokubacteria similarity UNIPROT
DB: UniProtKB
  • Identity: 69.4
  • Coverage: 196.0
  • Bit_score: 286
  • Evalue 2.50e-74

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CSP1_6_Rokubacteria → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 600
GACGACCTGGACCGCGGTGAGCCCGTCTTCGCGCTCGGCGCCACGGGTCCCAGGGAGCGGCGCGTGTCGGGCGGGCTCTTGACCTACCTCGGCGAGTTCGAGGCGTACTGGGAATATCTTCTCGATCGGAGCCTGGTGTCGAGCGCGGCGAATCCCGGCTTCGGCGGGGGCCCGCTGTTCACGATTACGGGGCGGATGGTCGGCGTGGTCTCGCTGAACCTGGGCGAGATCATGCGTGTGTCGCTGGCCATCCCCGGCGAGTGCTACCTGGCGAACCGCGAGGAGTACCTGCGTCACGGGCGCGCTGTCAGCCGACCTCAGCGGGCGTGGCTGGGCGTCTTCGCCCATCCCCTCGACGAGGGCGTGGTGGTGGCGGGGCTGGTGCCCAACGGGCCCGGCGCGCGCTCGGGCATCCGTGAGGGCGACGTCATACTCTCGCTCGACGCCCACCAGGTGCCGACGCGGAAGGACCTGTACCTGTCCCTCTGGCGGCGAGGGCCGGGAGAGCGGATCGCGCTCGAGGTGATGCGCGACAACGAGCTCAAGCGGCTCGACGTGACCGGCGGCGACCGCGCGGACTTCTACAAGCAGATCTCCTGA
PROTEIN sequence
Length: 200
DDLDRGEPVFALGATGPRERRVSGGLLTYLGEFEAYWEYLLDRSLVSSAANPGFGGGPLFTITGRMVGVVSLNLGEIMRVSLAIPGECYLANREEYLRHGRAVSRPQRAWLGVFAHPLDEGVVVAGLVPNGPGARSGIREGDVILSLDAHQVPTRKDLYLSLWRRGPGERIALEVMRDNELKRLDVTGGDRADFYKQIS*