ggKbase home page

PLM3_127_b2_sep16_scaffold_24727_5

Organism: PLM3_127_b2_sep16_Rokubacteria_68_9

near complete RP 42 / 55 MC: 4 BSCG 41 / 51 MC: 3 ASCG 13 / 38 MC: 3
Location: 4131..4520

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein TetR bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin similarity UNIREF
DB: UNIREF100
  • Identity: 83.8
  • Coverage: 130.0
  • Bit_score: 213
  • Evalue 9.50e-53
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 37.6
  • Coverage: 117.0
  • Bit_score: 74
  • Evalue 1.90e-11
Tax=GWA2_Rokubacteria_70_23_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 83.1
  • Coverage: 130.0
  • Bit_score: 210
  • Evalue 1.10e-51

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWA2_Rokubacteria_70_23_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 390
ATGGCGATCGGCGAGCGGTACGAGGGCATCCTGAAGGCGGCGTGCGACGTGATCGCGCGGCGGGGCTTCCACCAGGCGTCGATCCGCGAGATCGCCCGTGCCGCGGGGCTGTCGCTGGCGGGGCTCTATCACTACGTCGGCGGCAAGGACGAGCTTCTGTTCCTCGTCCTCGACCGGTCGCTCGACCGCTTGATCGAAGAGCTCGACGACGCGCTCGCCGAGGCGCGCACTCCGGAGCTCGAGCTGCTCGCGCTGATCCGCACCCACCTCGGCTTCGGCTTCCACCACGCCGCCGCGCTCAAGATCATCAACCGCGACTGGGAGCTGCTCTCCGGGCCGGGGCGCGACGAGATCTCGGCGAAGCGGCAGTCGTACCTCACGCGGGGCCTG
PROTEIN sequence
Length: 130
MAIGERYEGILKAACDVIARRGFHQASIREIARAAGLSLAGLYHYVGGKDELLFLVLDRSLDRLIEELDDALAEARTPELELLALIRTHLGFGFHHAAALKIINRDWELLSGPGRDEISAKRQSYLTRGL