ggKbase home page

PLM3_127_b2_sep16_scaffold_40597_3

Organism: PLM3_127_b2_sep16_Rokubacteria_68_9

near complete RP 42 / 55 MC: 4 BSCG 41 / 51 MC: 3 ASCG 13 / 38 MC: 3
Location: comp(1341..1727)

Top 3 Functional Annotations

Value Algorithm Source
copper resistance protein CopC; K07156 bin=bin7_NC10_sister species=Nitrosococcus halophilus genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 48.7
  • Coverage: 117.0
  • Bit_score: 112
  • Evalue 2.90e-22
copper resistance protein CopC similarity KEGG
DB: KEGG
  • Identity: 41.7
  • Coverage: 127.0
  • Bit_score: 97
  • Evalue 2.10e-18
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 47.9
  • Coverage: 117.0
  • Bit_score: 112
  • Evalue 4.10e-22

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_69_13 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 387
GTGATCCGCGGATGGGGCGCGACCCTGCGCGCCTGGGCGCTCTGCGCCGCGCTGCTCGCACAGGATCCCGGGGCCGCGGGGGCGCATGCCATCATCCTCGAGTCCGAGCCTGCGGTAGGCGCGAAGCTCGCCGAGGCGCCCACGCGCATCTACCTCCGCTTCAACAGCAAGCTCGAGAAGCGCCTGAGCCACGTCACGCTCACCGCGGCGGACGGCCGGCCGGTGCCTGTGGCCGTCAAGACCGACGGCAGCGAGAAGCCTGACCGGATCGTGCTGCCGCTCGGGTCGCTCCGTCCCGGCGCCTACGTGGTCCGTTACAAGGTTCTGGCGGCCGACGGTCACATCACGGAGGGCGCCCTGCGCTTTACCGTGCTCGAGCCGAAGTAG
PROTEIN sequence
Length: 129
VIRGWGATLRAWALCAALLAQDPGAAGAHAIILESEPAVGAKLAEAPTRIYLRFNSKLEKRLSHVTLTAADGRPVPVAVKTDGSEKPDRIVLPLGSLRPGAYVVRYKVLAADGHITEGALRFTVLEPK*