ggKbase home page

PLM3_127_b2_sep16_scaffold_57137_2

Organism: PLM3_127_b2_sep16_Rokubacteria_68_9

near complete RP 42 / 55 MC: 4 BSCG 41 / 51 MC: 3 ASCG 13 / 38 MC: 3
Location: 609..908

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix motif containing protein bin=GWA1_Deltaproteobacteria_52_35 species=ACD73 genus=ACD73 taxon_order=ACD73 taxon_class=ACD73 phylum=unknown tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis! similarity UNIREF
DB: UNIREF100
  • Identity: 60.6
  • Coverage: 94.0
  • Bit_score: 125
  • Evalue 2.60e-26
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 47.8
  • Coverage: 90.0
  • Bit_score: 84
  • Evalue 1.90e-14
Tax=RBG_16_Deltaproteobacteria_71_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 75.8
  • Coverage: 91.0
  • Bit_score: 136
  • Evalue 1.20e-29

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Deltaproteobacteria_71_12_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 300
ATGAGAGAGTTGACTCGGCGCAGAGAGCCCACCACCCCGGGCGAGATCCTTCGCGAGGAATTCTTGATTCCCCTTAGCATGACTCAAAAGCAACTGGCAGATCACCTCAGTTGCGATGTCAAGGTCATCAACCGCATCGTTAATGGCCGCAGCTCCGTGACCGCCGAAATGGCCTTGAAGCTGGGCGCCACGTTTCGGATCTCGCCCGAGTTTTGGCTCAACGCGCAGAAGGCCGTCGACCTTCATCAGGCGGCGAGCCACCTGTCCAACCTGCCGAAGCCACTGCTTCGAGCAGGCTGA
PROTEIN sequence
Length: 100
MRELTRRREPTTPGEILREEFLIPLSMTQKQLADHLSCDVKVINRIVNGRSSVTAEMALKLGATFRISPEFWLNAQKAVDLHQAASHLSNLPKPLLRAG*