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PLM3_127_b2_sep16_Rokubacteria_68_9

PLM3_127cm_b2_sep2016_Rokubacteria_68_9
In projects: PLM3_127cm_b2_sep2016  |  PLM2016-drep98-anvio  |  PLM2016-NC-80p  |  rokubacteria_ggkbase

Consensus taxonomy: Rokubacteria  →  Bacteria

Displaying items 301-350 of 674 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
PLM3_127_b2_sep16_scaffold_49149
Phylum: Proteobacteria (66.67%)
6 4814 bp 65.29 8.66 71.35
PLM3_127_b2_sep16_scaffold_25263
Species: Candidatus Methylomirabilis oxyfera (50%)
6 4598 bp 69.36 7.93 87.76
PLM3_127_b2_sep16_scaffold_35423
Domain: Bacteria (83.33%)
6 2754 bp 65.87 12.58 75.60
PLM3_127_b2_sep16_scaffold_134682
Species: GWA2_Rokubacteria_70_23_curated (50%)
6 3515 bp 67.91 5.97 90.13
PLM3_127_b2_sep16_scaffold_55509
Species: GWA2_Rokubacteria_70_23_curated (80%)
5 3034 bp 68.75 8.40 97.00
PLM3_127_b2_sep16_scaffold_25525
Species: GWC2_Rokubacteria_70_16_curated (60%)
5 6618 bp 67.45 6.21 70.67
PLM3_127_b2_sep16_scaffold_14214
Species: GWA2_Rokubacteria_70_23_curated (80%)
5 6126 bp 71.43 9.04 97.31
PLM3_127_b2_sep16_scaffold_31553
Phylum: Rokubacteria (80%)
5 2950 bp 67.63 12.31 93.25
PLM3_127_b2_sep16_scaffold_24281
Species: GWA2_Rokubacteria_70_23_curated (60%)
5 3426 bp 68.88 8.41 99.12
PLM3_127_b2_sep16_scaffold_121378
Species: GWA2_Rokubacteria_70_23_curated (60%)
5 2772 bp 66.05 7.58 93.40
PLM3_127_b2_sep16_scaffold_24286
Species: GWC2_Rokubacteria_70_16_curated (60%)
5 3425 bp 69.20 8.76 91.01
PLM3_127_b2_sep16_scaffold_14735
Phylum: Rokubacteria (80%)
5 4571 bp 69.88 6.14 94.90
PLM3_127_b2_sep16_scaffold_38647
Species: RLO_Betaproteobacteria_65_14 (60%)
5 3146 bp 67.07 8.68 99.36
PLM3_127_b2_sep16_scaffold_18856
Phylum: Rokubacteria (80%)
5 3967 bp 66.15 11.61 81.45
PLM3_127_b2_sep16_scaffold_28137
Phylum: Rokubacteria (60%)
5 3154 bp 65.54 9.99 94.07
PLM3_127_b2_sep16_scaffold_21017
Species: GWC2_Rokubacteria_70_16_curated (60%)
5 4443 bp 71.30 9.35 96.29
PLM3_127_b2_sep16_scaffold_12836
Phylum: Rokubacteria (80%)
5 4948 bp 67.42 6.03 95.49
PLM3_127_b2_sep16_scaffold_27893
Phylum: Rokubacteria (60%)
5 5155 bp 70.38 8.09 91.13
PLM3_127_b2_sep16_scaffold_49429
Phylum: Rokubacteria (100%)
5 4390 bp 69.02 9.09 93.55
PLM3_127_b2_sep16_scaffold_31822
Species: GWC2_Rokubacteria_70_16_curated (80%)
5 3918 bp 71.69 8.00 79.94
PLM3_127_b2_sep16_scaffold_23670
Species: GWC2_Rokubacteria_70_16_curated (60%)
5 4473 bp 66.62 10.16 89.94
PLM3_127_b2_sep16_scaffold_35446
Species: GWA2_Rokubacteria_70_23_curated (60%)
5 3870 bp 68.29 9.15 87.44
PLM3_127_b2_sep16_scaffold_28913
Domain: Bacteria (60%)
5 3104 bp 66.46 8.26 91.82
PLM3_127_b2_sep16_scaffold_29905
Species: GWA2_Rokubacteria_70_23_curated (80%)
5 5675 bp 69.25 8.19 85.16
PLM3_127_b2_sep16_scaffold_56842
Domain: Bacteria (60%)
5 3034 bp 68.36 10.53 83.85
PLM3_127_b2_sep16_scaffold_74580
Species: GWA2_Rokubacteria_70_23_curated (60%)
5 3088 bp 69.17 6.95 95.21
PLM3_127_b2_sep16_scaffold_54109
Species: GWA2_Rokubacteria_70_23_curated (100%)
5 3159 bp 68.53 7.64 90.41
PLM3_127_b2_sep16_scaffold_19328
Domain: Bacteria (100%)
5 3910 bp 68.98 11.01 94.68
PLM3_127_b2_sep16_scaffold_22453
Species: GWA2_Rokubacteria_70_23_curated (80%)
5 5109 bp 69.11 11.13 93.07
PLM3_127_b2_sep16_scaffold_19078
Species: GWA2_Rokubacteria_70_23_curated (80%)
5 3942 bp 67.76 9.06 89.57
PLM3_127_b2_sep16_scaffold_32807
Species: GWA2_Rokubacteria_70_23_curated (60%)
5 2881 bp 68.90 7.29 97.47
PLM3_127_b2_sep16_scaffold_99127
Species: GWC2_Rokubacteria_70_16_curated (80%)
5 3595 bp 67.48 9.22 79.69
PLM3_127_b2_sep16_scaffold_30800
Domain: Bacteria (100%)
5 4063 bp 65.81 7.42 88.24
PLM3_127_b2_sep16_scaffold_23195
Species: GWC2_Rokubacteria_70_16_curated (80%)
5 3520 bp 66.82 8.18 97.59
PLM3_127_b2_sep16_scaffold_23203
Domain: Bacteria (100%)
5 3519 bp 67.35 8.31 94.54
PLM3_127_b2_sep16_scaffold_27173
Phylum: Rokubacteria (60%)
5 3219 bp 69.52 8.76 95.99
PLM3_127_b2_sep16_scaffold_31871
Species: GWC2_Rokubacteria_70_16_curated (80%)
5 2931 bp 65.81 8.39 84.34
PLM3_127_b2_sep16_scaffold_17096
Class: Betaproteobacteria (60%)
5 4197 bp 68.98 8.79 88.99
PLM3_127_b2_sep16_scaffold_28961
Phylum: Rokubacteria (80%)
5 3101 bp 68.33 7.69 83.78
PLM3_127_b2_sep16_scaffold_27178
Domain: Bacteria (80%)
5 4390 bp 66.10 7.62 73.53
PLM3_127_b2_sep16_scaffold_30563
Species: R_Alphaproteobacteria_66_14 (60%)
5 3005 bp 67.35 8.54 97.04
PLM3_127_b2_sep16_scaffold_17869
Domain: Bacteria (100%)
5 5067 bp 69.80 9.62 99.88
PLM3_127_b2_sep16_scaffold_21081
Domain: Bacteria (100%)
5 3719 bp 68.57 7.30 99.06
PLM3_127_b2_sep16_scaffold_36180
Phylum: Rokubacteria (60%)
5 2721 bp 69.79 11.19 95.48
PLM3_127_b2_sep16_scaffold_83357
Domain: Bacteria (80%)
5 2611 bp 66.37 5.34 85.25
PLM3_127_b2_sep16_scaffold_50544
Species: GWC2_Rokubacteria_70_16_curated (60%)
5 3167 bp 67.51 6.44 98.80
PLM3_127_b2_sep16_scaffold_10442
Domain: Bacteria (60%)
5 6324 bp 62.65 12.07 74.62
PLM3_127_b2_sep16_scaffold_83363
Phylum: Rokubacteria (80%)
5 2537 bp 70.44 7.15 102.52
PLM3_127_b2_sep16_scaffold_62813
Species: GWA2_Rokubacteria_70_23_curated (60%)
5 3240 bp 69.60 7.73 92.69
PLM3_127_b2_sep16_scaffold_74638
Species: GWA2_Rokubacteria_70_23_curated (80%)
5 3011 bp 69.55 9.07 98.34
Displaying items 301-350 of 674 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.