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PLM3-1_200_b2_sep16_scaffold_62956_2

Organism: PLM6_200_b2_sep16_Chloroflexi_RIF-CHLX_70_7

near complete RP 40 / 55 MC: 4 BSCG 41 / 51 MC: 2 ASCG 8 / 38
Location: comp(597..1190)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily bin=GWC2_Chloroflexi_73_18 species=Alicyclobacillus acidocaldarius genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 56.2
  • Coverage: 176.0
  • Bit_score: 198
  • Evalue 6.30e-48
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 37.5
  • Coverage: 184.0
  • Bit_score: 110
  • Evalue 3.70e-22
Tax=RBG_16_RIF_CHLX_70_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 87.9
  • Coverage: 182.0
  • Bit_score: 320
  • Evalue 9.00e-85

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Taxonomy

RBG_16_RIF_CHLX_70_13_curated → RIF-CHLX → Bacteria

Sequences

DNA sequence
Length: 594
ATGGAAGGCGTCCCCGACGGACGCCCTTACGCGGAGAGGCCGGTGGATCGCGACCTCATCGAAGCGGCTCAGCGCGGTGACGAGGCGGCGTTCGTCGACCTGGTGCGCTCGCGCGGCGACCGCTTCTTCGCGATCGCGCATCGGATCCTCCGGGATGTCGATCGGGCCGAGGATGCCCTGCAGGACGCGCTGGTGATCGCCTGGCGAGACCTGCGGGACCTCCGCGATCCGGACCGCTTCGACGCCTGGGTCCACCGGCTCCTCACGAACGTCTGCATCGCCCAGGCCGGGCGGGAGCGGAAGCGAATGTCGAACCTGTACGTGCTCCCCGTCGACGACCCGGCCGCACCCGACGATCTCCTCGGCGTGGCCGTGCGCGACCAGCTGGACCGCGGCTTTCGGCGCCTCAGCGCCGACGAGCGGGCCATCCTCGTGCTCCGCCACTACGTGGGCTACGAGCCCATCGAGATCGCCGAGCTCCTTGGCCTTTCCGCGGGAACGATTCGTTCCCGTCTCCATCACGCCCATCGCGCCATGCGCGCCGCGCTCGACGCGGACGCCCGGGCGGCGACCGTCGGAGGAACCTCGGCATGA
PROTEIN sequence
Length: 198
MEGVPDGRPYAERPVDRDLIEAAQRGDEAAFVDLVRSRGDRFFAIAHRILRDVDRAEDALQDALVIAWRDLRDLRDPDRFDAWVHRLLTNVCIAQAGRERKRMSNLYVLPVDDPAAPDDLLGVAVRDQLDRGFRRLSADERAILVLRHYVGYEPIEIAELLGLSAGTIRSRLHHAHRAMRAALDADARAATVGGTSA*