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PLM3-1_200_b2_sep16_scaffold_87305_1

Organism: PLM6_200_b2_sep16_Chloroflexi_RIF-CHLX_70_7

near complete RP 40 / 55 MC: 4 BSCG 41 / 51 MC: 2 ASCG 8 / 38
Location: comp(2..1126)

Top 3 Functional Annotations

Value Algorithm Source
RpoD family RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor bin=bin8_Chloro species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi similarity UNIREF
DB: UNIREF100
  • Identity: 61.5
  • Coverage: 335.0
  • Bit_score: 386
  • Evalue 1.80e-104
rpoD; RNA polymerase similarity KEGG
DB: KEGG
  • Identity: 32.3
  • Coverage: 368.0
  • Bit_score: 132
  • Evalue 2.30e-28
Tax=RBG_16_RIF_CHLX_70_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 75.3
  • Coverage: 384.0
  • Bit_score: 545
  • Evalue 4.30e-152

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Taxonomy

RBG_16_RIF_CHLX_70_13_curated → RIF-CHLX → Bacteria

Sequences

DNA sequence
Length: 1125
CTGACTCGACCCCGCCGCGCCAAGGCGGACCTCGTGGAGGCCAAGCTGGCCGGCCTGCACCCGCCGCGCTCGGCCGAGGACGATGACGACCTGGACGAAGAGGAAGAGGACACCGACCGCGCGCCCGTCGTCGTCGTTGCCGAGGAAGAGCCGGACATCGACGTCGTCGAGGAGGAGGGCGTCGAGGTCGTCGGCGAGGACGGCACGACGGCCGCCGAGGCGAAGCTGCCCTTGGACGCCCCCGCCAAGCTCGATGCGGTCGAGCTCGAGGAGCCCACCGCCGAGGAGCTCGAGGCCCTCTCCGCGGACATGATCGGGATCGACGACCCGGTCCGGATGTACCTCAAGGAGATCGGCAAGGTCGCACTGCTGACGGCCGAGGAAGAGGTGGTCCTGGCGAAGGCGATCGAGCTCGGCGAGCAGACGGTCGATGAGCCGTGGAAGGGCGTCGTGTCCCTCCATGAGTGGACGACGCACGAGACGGAGCGCAAGACGCGGACGCTGAAGCCGCAGCACCGGCTTCCTTTGGGTGAGGAGGCGCATCGGCTGGTGCGCGAGGCGGTTTCGGCTGAGGACGCGGCTGATCTGCTGACGCCGTCGCCCGACTTCCACCTGATCCGCGCGGGTCGGGACGCGCAGTCCGAGGGCACGAAGGTGCTCCTGAAGGAAGGTCGCAAGCTGGTCACGGCGTACAACGCGTCGCATTCGCCGGACAATTTCCTGCGGCTCCACGACTGGGCGTACTTCGCGGTTCACAACGGCGATCTGGATTCGCGCGACAACATCGGCCTGCGCGCGATCTACGACTGGACGCGCGATCTCGTGGCGTTCCCGGCGCTGGAGCGGCTCGTGGCTAGCGAGCGCGAGGCGGAGCTCCTGAAATACATGGGCCACGATCCAGCCGTTCCGCCGAACACGAAGCTGGCGCATCGCAAGGGCGAGCTGGTTCGGATTGGGCGGGATGCTAGAGAGCAGCTGACGTCGGCAAACCTGCGGCTGGTCGTGTCGATCGCGAAGAAGTACATCGGCCGCGGGATGTCGTTCCTGGACCTGATCCAGGAGGGGAACATCGGGCTCATTCGGGCGGTCGAAAAATTCGACTACGAGAAGGGCTACAAGTTCTCG
PROTEIN sequence
Length: 375
LTRPRRAKADLVEAKLAGLHPPRSAEDDDDLDEEEEDTDRAPVVVVAEEEPDIDVVEEEGVEVVGEDGTTAAEAKLPLDAPAKLDAVELEEPTAEELEALSADMIGIDDPVRMYLKEIGKVALLTAEEEVVLAKAIELGEQTVDEPWKGVVSLHEWTTHETERKTRTLKPQHRLPLGEEAHRLVREAVSAEDAADLLTPSPDFHLIRAGRDAQSEGTKVLLKEGRKLVTAYNASHSPDNFLRLHDWAYFAVHNGDLDSRDNIGLRAIYDWTRDLVAFPALERLVASEREAELLKYMGHDPAVPPNTKLAHRKGELVRIGRDAREQLTSANLRLVVSIAKKYIGRGMSFLDLIQEGNIGLIRAVEKFDYEKGYKFS