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PLM1_100_b1_sep16_scaffold_7547_5

Organism: PLM1_100_b1_sep16_Tectomicrobia_59_7

near complete RP 44 / 55 BSCG 45 / 51 ASCG 9 / 38 MC: 1
Location: comp(2031..2570)

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein RNP-3 bin=CNBR_ACIDO species=Comamonas testosteroni genus=Comamonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 40.7
  • Coverage: 209.0
  • Bit_score: 123
  • Evalue 1.40e-25
RNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 47.5
  • Coverage: 99.0
  • Bit_score: 89
  • Evalue 1.10e-15
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 50.0
  • Coverage: 182.0
  • Bit_score: 144
  • Evalue 1.00e-31

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Taxonomy

R_Acidobacteria_65_29 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 540
ATGGCGGTGCGCCTTTTTGTTGGGAACCTCCCGTATGACGTGACTGAGGCGGAGCTGCGTGCCCACTTCGCCGCCATTGGCCCCCTCTCTTACCTCTCGCTGGCCATGGACCGGGACACCGGAAAGCCGCGCGGGTTCGCGTTCATTGAATTCAACGCACGGGCCGACGCCGAGGACGCGATACGTCGCCTCAACAATCAGGCGTTCAAGGGCCGACCGCTGGCGGTGAACGAAGCGCGCGCGCGGGACGATCATGCGCCCCCCCGTGCCCCTCGCCCCGCTGCACCGCGACCGGCGATCTCGGCGGCACCGAGCGCCAGTGACGGCCGGGACTTCGGCCCCGATGCGGCCCCGCGGCGTCGGCGCACACCGGCGAAGGGCGCCGCGAAAACCGAGCGCGGACTCAAGCCCTCCCTATACAAGCGCGCCACCGGACCCGTACGCTTCAGCGCCGCAGACGACGACGGTGACGAGGACGAGGTGCGCGGCGCCCACGGTGCGCGGCGACGAGCAGACGCGGGCGATCACGACACCGCGTAG
PROTEIN sequence
Length: 180
MAVRLFVGNLPYDVTEAELRAHFAAIGPLSYLSLAMDRDTGKPRGFAFIEFNARADAEDAIRRLNNQAFKGRPLAVNEARARDDHAPPRAPRPAAPRPAISAAPSASDGRDFGPDAAPRRRRTPAKGAAKTERGLKPSLYKRATGPVRFSAADDDGDEDEVRGAHGARRRADAGDHDTA*