ggKbase home page

PLM1_100_b1_sep16_scaffold_2003_12

Organism: PLM1_100_b1_sep16_Actinobacteria_69_15

near complete RP 47 / 55 MC: 3 BSCG 49 / 51 MC: 2 ASCG 12 / 38
Location: comp(10350..10490)

Top 3 Functional Annotations

Value Algorithm Source
NAD/NADP transhydrogenase alpha subunit Tax=Oscillatoriales cyanobacterium JSC-12 RepID=K8GM53_9CYAN bin=16ft_combo_ws3_JS1 species=Oscillatoriales cyanobacterium JSC-12 genus=unknown taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 58.7
  • Coverage: 46.0
  • Bit_score: 58
  • Evalue 1.40e-06
alanine dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 54.5
  • Coverage: 44.0
  • Bit_score: 54
  • Evalue 7.40e-06
Tax=GWC2_Nitrospirae_57_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 58.7
  • Coverage: 46.0
  • Bit_score: 61
  • Evalue 3.00e-07

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWC2_Nitrospirae_57_9_curated → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 141
ATGTACTCGCGCAACGTCTATGCGTTTCTCAGCCACCTGCTCGAGGAGGGTGAGCTCAAGCTCGACTTCGACGACGAGATCACGCGGGAGACGTGCGTGACGCATGACGGCCGCATCCTCAAGGAGCCCGTGGCCGCGTGA
PROTEIN sequence
Length: 47
MYSRNVYAFLSHLLEEGELKLDFDDEITRETCVTHDGRILKEPVAA*