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PLM1_100_b1_sep16_scaffold_4012_11

Organism: PLM1_100_b1_sep16_Actinobacteria_69_15

near complete RP 47 / 55 MC: 3 BSCG 49 / 51 MC: 2 ASCG 12 / 38
Location: 8095..9615

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FA01_CONWI similarity UNIREF
DB: UNIREF100
  • Identity: 66.5
  • Coverage: 355.0
  • Bit_score: 443
  • Evalue 1.70e-121
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 66.5
  • Coverage: 355.0
  • Bit_score: 443
  • Evalue 4.80e-122
Tax=RBG_16_Actinobacteria_68_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 75.2
  • Coverage: 318.0
  • Bit_score: 461
  • Evalue 8.40e-127

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Taxonomy

RBG_16_Actinobacteria_68_12_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1521
ATGCGGACTGTCCGGTGGGCGTGGAAAAGTGCCGCGGTCACGTTCGCGTATTTCCACAAAGCAGCCGTTGACGAGTCAGGGAACTCGACCTACGGTCAAAAAGGGGGTCTGGACGTGGGAGCAGGCGAGGGGAGAGGAGTGACAGCCGTGGAGGGGACGGCGGAGCGGGACGATTCAACCCAGGCGCTCGTGCGCCAGGGACAGGAAGCAGGGTTTCTCACGCAGGAGGAGGTCGCGCTCGCACTGGACGAGCTCGATCTCGACGTGGGCCAGATCGACGACTTCTACCACGCTCTCGAGGAGCTCCACATCGAGGTGGTCGAGGTCGAGGAAGAGGAGAGCGAGCTCGTCCTCGAGCCGGAGGTCCGCGAGGTCTCGACCGACGCACTGCAGCTCTTCCTCAAGGACATCGGCAAGGTGCCGCTGCTGACGGCGGCCCAGGAGGTCGAGCTGGCGAAGCGGATCGGGTGCGGCGACCACCGTGCGAAACAGACGATGGTGGAGTCGAACCTGCGCCTCGTGGTCTCGATCGCGAAGAACTACCGCAACCAGGGCCTCCCTTTCCTCGATCTCATCCAGGAGGGGACGATCGGGCTCGTGCGCGCGGCGGAGAAGTTCGACCACCGCAAGGGGTTCAAGTTCTCCACCTACGCGACGTGGTGGATCCGTCAGGCGGTCGCGCGGGCGCTCGCGGACAAGTCGCGGACGATTCGCATGCCCGTGCACGTCGTCGAGAAGCTGAACAAGATCGGCCGTGCCGAGCGGAAGCTCGTGTCGGAGCTCGGCCGCGAGCCTCTGGCCGAAGAGATCGCTCTCGAGCTCGAGCTCGAGGTCGAGGAGGTCGAGCAGATCCGGCGCACCTCGCACGCGCCGATCTCGCTCGAGAAGCCGGTCGGCGACGACGAAGAGTCCGAGTTCGGGCACTTCCTCGCGGACGAGCGGGCGGCGGCTCCGGACGAGGCGGCCGAGACAACCATGCGCAAGGAGACGCTCAGGCGCATCCTGAGCATGCTCTCGGCGCGCGAGCGGCGGGTGCTCGAGCTCCGCTACGGCCTCAACGGACAGCACCCGCGCACGCTCGACGAGGTGGGGCGGGCCTTCAACGTCACCCGCGAGCGCGTGCGGCAGATCGAGAACCAGAGCCTGAAGAAGCTCCAGGCGCTCGCCGAGACGCAGAACCTGCGCTACACGATTGCCCCGGGCGTAGGGGCGGGATTCATCCCGCCCGGAAGTTCGGAAGCCAGCCGTCGCGGTAGCCTGTCGGCACGTCGTCGCGGAAGGACGCGTATGCCTCCGCGCCCTCGCGCGTCTCGCGCTCGACTGCCGCTCCGTGGCGCTGCGCGAACTCCGCGGCGGGGTAGACGACCTCTTCGTCAGGACGCGCGCCGACAGCAAGCAGGACGCACGGGCCGTCGCCGGCGCCCACGAAGACGTGCTCCGTCCAGGCAGGGCAGTGGACGAAATCCCAGGCGCGCAGGAGCCGCTCCTCCCCCTCGACGAGGAGCAGACAGGACCCGCTGA
PROTEIN sequence
Length: 507
MRTVRWAWKSAAVTFAYFHKAAVDESGNSTYGQKGGLDVGAGEGRGVTAVEGTAERDDSTQALVRQGQEAGFLTQEEVALALDELDLDVGQIDDFYHALEELHIEVVEVEEEESELVLEPEVREVSTDALQLFLKDIGKVPLLTAAQEVELAKRIGCGDHRAKQTMVESNLRLVVSIAKNYRNQGLPFLDLIQEGTIGLVRAAEKFDHRKGFKFSTYATWWIRQAVARALADKSRTIRMPVHVVEKLNKIGRAERKLVSELGREPLAEEIALELELEVEEVEQIRRTSHAPISLEKPVGDDEESEFGHFLADERAAAPDEAAETTMRKETLRRILSMLSARERRVLELRYGLNGQHPRTLDEVGRAFNVTRERVRQIENQSLKKLQALAETQNLRYTIAPGVGAGFIPPGSSEASRRGSLSARRRGRTRMPPRPRASRARLPLRGAARTPRRGRRPLRQDARRQQAGRTGRRRRPRRRAPSRQGSGRNPRRAGAAPPPRRGADRTR*