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PLM4_90_b1_sep16_scaffold_1090_1

Organism: PLM4_90_b1_sep16_Deltaproteobacteria_48_13

near complete RP 45 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 10 / 38
Location: 50..3463

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair coupling factor bin=GWC2_Deltaproteobacteria_55_46 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter similarity UNIREF
DB: UNIREF100
  • Identity: 44.5
  • Coverage: 1170.0
  • Bit_score: 923
  • Evalue 1.60e-265
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 48.7
  • Coverage: 963.0
  • Bit_score: 878
  • Evalue 1.70e-252
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 81.4
  • Coverage: 1133.0
  • Bit_score: 1833
  • Evalue 0.0

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Taxonomy

RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3414
ATGGATGATTGCGCAAGAGGAAATGTTTCTTCCATGGATTCGTGGTTCGACTCTGAACCATGGAGGAACCGGAAACCTATTGGATTGACCCGTCTCGCAGGTTCTTCCAAGGCCTACTTTTTGTCTCATTGGAGAGAAAAGGTGAGGGGGCCCTTGCTGGTGCTCGTCCCGCACCTAAGGGATGTTGAGACGCTTCTCGAAGATCTCCGATTTTTTATGAAGGGATCGGAAGTTCCTTTCTTTCCCTTCCCTCAATGGGAAACCCTTCCTTATGATGAAATTTCCCCTCATCCTGAAATCATCAGAGAACGGGTGAGAGCTCTTTATTCCCTTCTAAAAGGCGAGGAGGGGATGATCGTCTCTTCCGTCAAAGCTCTGATGCAGAAGGTTCTGGCTCCGGGCGATTTAAAAGAATCTGTTTTTTCTCTCTCTGTGGGAGAAGAGACCGATCGCGACCAGTTGATCCATTTCCTCCAAGGAGGAGGATATACCTCAACAAAGATTGTCGAGGAGAGAGGAGATTTTAGCGTCCGGGGGGCCATCATCGATATCCATACGCCCTTTTATGAAGAACCCCTTCGATTGGAATTTGATGGAGACCGCATCGTATCCATCCGCCGGTTCGAGACAGAGACTCAGCGGTCCCTTCCGCAGGGGATGATGGAAAATGCCATCCTCCTCCCGGCGAGGGATATTTCAGTCGATGCAACCATTCAACCCCTGCAGACCCTTTTCGATTACTTGAAGCGGAATGAGATCCTCTTTGTTGAAGAGGGCGACGAAGTGGAGAAAGAGGCCCAGGCCTTTTCTCGTCTGATCGAGGAACATTATGAGAAGGCCATGTTAAAAAAGGGGTCCGTGCTTCCGCCGGAGACCGCTTATCTCCGTGATGAAGAGGTCTCGCTTTGTTCCGAAAGATTTCAAAGAGTTTATCTCCAGGGAGGGCCCCTTGCCCCTTCCCCGTGTCAGCAAGTTTTTTCTTTTGAGATGGAGACCAATGAAAATCTCCAGAGGGAGATGAAGGCCTTCCTCTCTGCTAAAACCGGCTCCCCGGAAACTTCTCCTTTCTCGATCCTCCTGAAGAACCTTCATGATTGGCAGGAAAAAGGGGTGAGGGTGTTTATTGTTTCTCACACCCAGGGTCAGGCCGAGCGATTGAGAGACCTTCTCTCCGAGTACGGAGTGGAGCCCAGACTGGAAAAAACAAAAAGATTCGGAGAGGCCCTGGATCAATCCAAAGAGGGCCTCGTCCTCCTTGTCGGCTCCCTCTCGTCAGGGTTTCGAAACCCCGGGGAGGGCTGGGTGATCCTGACGGAAGAGGAAATTTTTGGTGAGAGAAGGAGGCTTCCTGAAGGAAGGGTTCGGACTTCCGTCACCTCCACTTCGTGGCAGAGAGGGAGCCCAGCCGTCTCTTCTTACCGTGAACTTCGAGAAGACGATTTCATCGTCCATATCGACTATGGAGTGGGCCGCTACAGAGGGCTGAGGCATTTGAAGATCTGGGGGGTCTCGAACGACTACCTTCTCCTGGAGTATCAAGACGGGGATAAACTCTATCTTCCCGTGGACCGGCTCAATTTAATCCAACGCTATATCGGAGGAGATGGGAAACCTCCCAGGCTGGATAAACTGGGAAGTCATTCATGGGAGAGGGCGAAGAAGAGGGCAGAGGCTGCCGTTTCGGAGATGGTGAAAGAGCTCCTCGACCTCTATGCGGCCAGACAGGTTTTCGAAGGCTTCAAATTCCCTCACCTGGATCAGTTCTATAAAGAGTTTGAAGCCACGTTTGAATATGAAGAGACCCCGGATCAGATGCAAGCGATTGACGAGGTGATGAGCGACATGGACAAGCCCAAGCCCATGGACCGGCTGATCTGCGGGGACGTTGGATATGGAAAGACCGAGGTGGCCATCCGGGCGGCCTATCGTGCCGTGATGAGCGGGAAGCAGGTTGCGATTTTAGTCCCGACGACGGTCCTGGCCCAGCAGCATTCCCAGACCTTTACTGAGCGATTCAAGCTTTATCCGGTGGCGATCGAGGCGTTGAGCCGGTTCAAAAGTCCCCGGGAGCAGAAGGAGATCCTTCAACGGCTGAAGGAAGGCAAGGTGGACATCGTCATCGGGACGCACCGGCTTTTGCAGAAAGACGTCTCCTTCCGAGATTTGGGACTGGTGGTCATTGATGAGGAGCATCGGTTTGGCGTCTCCCATAAGGAAAAATTGAAGCAGATGAGGAAATTAGTGGATGTGATCACCCTCACGGCGACCCCCATTCCGAGGACACTCCAGATGGCTGTCTCTGGAATTCGGGACCTCAGCCTCATCCAGACCCCCCCTGAAAATCGCCTCTCGATCCGGACTTTCGTGATCCGTTATGACGAGGAAGTCATCCGAGACGCTATCCAAAGGGAGTTTGAACGAGGGGGTCAAGTCTTCTTCGTCCACCATCGCGTCCAAAACATCCATACGATCGCAAGCCATCTGAAGCGGCTTATTCCAGAGGCCTCCTTGGCCATTGCCCATGGTCAGATGGGAGAAAAGGAATTGGAGAAGGTGATGCTCCAATTCGTGAGGAAGGAAGTGAATCTTCTCGTCTGTACGAGCATCATCGAATCGGGGTTGGATATCCCGTCCGCCAACACCATCCTGATCAATCATGCCGAGCGGTTTGGTCTGGCAGACCTCTATCAAATCCGCGGTCGAGTGGGCCGGGGGAGCCATCAAGCCTATGCCTATCTTATCGTTCCCGGAGAGCTTGCCCTTTCCAGGGATGCGATGAGAAGGCTTCGGGCGATTCAGGAATTGAGCGAGCTGGGATCCGGATTCAAACTCGCGATTCAGGATCTGGAGATCCGGGGAGCGGGAAACCTCCTCGGACCCTCTCAATCCGGGCACATCGCAGCTTTGGGGTTTGAACTTTATACCCAATTGATGGAGAAAGCGGTCAAGGAATTAAAAGGGGAGGAAGTCATCGAAGAGATCACTCCAGAGATTCACTTTCATCTCCCCGCCTTCATTCCAGAGACCTATGTGGAGGATCCGGGAGAACGGTTGAGTCTTTATCGAAGGCTTTCCCTTTCACGGTCTGAAGAGGAAGTAGAAAGGATACGAGGGGAACTGATCGACCGATTTGGGAAGAATCCCAAAGAGGTGGATCATCTCCTGGAAGTGATCAAGGTAAAAATTCTCCTGACGAGATTATCGATCAAGAAGCTTGAGGAGACGCCCTCTCAATTCGTCCTCACCTTTGATAAAAGCACCCCGGTCTCTCCTCAAAGAGTCGTTGATTTTGTGCATCAAGGAGGGGGTAAATATCGATTCACCCCGGACTCAAAACTGGTCATCGAAGAATGGCCCGGGGCAAGACAAGACCCCTTCGGCGCGGCCAAAAAGCTATTGCAAGCATTGGCCTGA
PROTEIN sequence
Length: 1138
MDDCARGNVSSMDSWFDSEPWRNRKPIGLTRLAGSSKAYFLSHWREKVRGPLLVLVPHLRDVETLLEDLRFFMKGSEVPFFPFPQWETLPYDEISPHPEIIRERVRALYSLLKGEEGMIVSSVKALMQKVLAPGDLKESVFSLSVGEETDRDQLIHFLQGGGYTSTKIVEERGDFSVRGAIIDIHTPFYEEPLRLEFDGDRIVSIRRFETETQRSLPQGMMENAILLPARDISVDATIQPLQTLFDYLKRNEILFVEEGDEVEKEAQAFSRLIEEHYEKAMLKKGSVLPPETAYLRDEEVSLCSERFQRVYLQGGPLAPSPCQQVFSFEMETNENLQREMKAFLSAKTGSPETSPFSILLKNLHDWQEKGVRVFIVSHTQGQAERLRDLLSEYGVEPRLEKTKRFGEALDQSKEGLVLLVGSLSSGFRNPGEGWVILTEEEIFGERRRLPEGRVRTSVTSTSWQRGSPAVSSYRELREDDFIVHIDYGVGRYRGLRHLKIWGVSNDYLLLEYQDGDKLYLPVDRLNLIQRYIGGDGKPPRLDKLGSHSWERAKKRAEAAVSEMVKELLDLYAARQVFEGFKFPHLDQFYKEFEATFEYEETPDQMQAIDEVMSDMDKPKPMDRLICGDVGYGKTEVAIRAAYRAVMSGKQVAILVPTTVLAQQHSQTFTERFKLYPVAIEALSRFKSPREQKEILQRLKEGKVDIVIGTHRLLQKDVSFRDLGLVVIDEEHRFGVSHKEKLKQMRKLVDVITLTATPIPRTLQMAVSGIRDLSLIQTPPENRLSIRTFVIRYDEEVIRDAIQREFERGGQVFFVHHRVQNIHTIASHLKRLIPEASLAIAHGQMGEKELEKVMLQFVRKEVNLLVCTSIIESGLDIPSANTILINHAERFGLADLYQIRGRVGRGSHQAYAYLIVPGELALSRDAMRRLRAIQELSELGSGFKLAIQDLEIRGAGNLLGPSQSGHIAALGFELYTQLMEKAVKELKGEEVIEEITPEIHFHLPAFIPETYVEDPGERLSLYRRLSLSRSEEEVERIRGELIDRFGKNPKEVDHLLEVIKVKILLTRLSIKKLEETPSQFVLTFDKSTPVSPQRVVDFVHQGGGKYRFTPDSKLVIEEWPGARQDPFGAAKKLLQALA*