ggKbase home page

PLM4_90_b1_sep16_scaffold_3601_4

Organism: PLM4_90_b1_sep16_Deltaproteobacteria_48_13

near complete RP 45 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 10 / 38
Location: comp(1639..2550)

Top 3 Functional Annotations

Value Algorithm Source
TRAP-type C4-dicarboxylate transport system, large permease component bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 43.2
  • Coverage: 301.0
  • Bit_score: 276
  • Evalue 1.60e-71
TRAP dicarboxylate transporter subunit DctM similarity KEGG
DB: KEGG
  • Identity: 42.2
  • Coverage: 303.0
  • Bit_score: 262
  • Evalue 1.20e-67
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 47.5
  • Coverage: 301.0
  • Bit_score: 298
  • Evalue 7.30e-78

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 912
ATGATTCGGGCAGGTTATACCCCACCCCGGGCCTCAGCCATCGTCGCTGCCGCTACAGGAATGGGGATGATGATCCCACCCTGCCTCAACATGGTTGTCCTGGGAGCCATGACGAATATTTCCATCGCCGGTCTCTTCATGGGAGGCTTTCTCCCCGGGTTTCTCATGGCCATGACCCTGATGGTGATCATCTATATTCAGTCCTCGAGAGGGACTCTTCCAGGAGCAGAGGGGAAGAGATCTCCCTTCAAGGAGATCCTTACTTCCTTCAAGGACAGCATTATCCCCCTCATGATGCCTGTTATTATTTTCGGTGGAATATTTGGCGGAGTCTTCACTGCTACGGAGGCTGCGTCTGTAGCCACGGTCTATGCCTTCATCATCTCTGTCTTCGTTTATAAAGAGATCAAAGGAAGGGCCCTTTTTCGCATCCTTGTGGATACGGCAGTCATGACGGGCGTGGTCTGTCTTCTGGTGGGAGCCGCCACAGGTTTTTCATGGATCCTCGCCACGCACCAGGTTCCTCAAATCCTGGGCACGTTCATCGGGTCCATTTCCGAGGGCAGGGTCATTTTCCTTCTGATGTCGATCGCTGTCTTTCTTTTCTTTGGAATGATTCTTGATGGCCTGCCCGCCATTCTCATCTTCTTCCCCATCCTCTTTCCTATTGCATTGTCCTTAGGGATTCACCCATTACACTTCGGAGTCCTCGTCATCGCCATCGTGGGAATATCGATCGTCGCCCCTCCCGTTGGGCTCTGTCTCGTTATTATTTGCAGCATCGCCAGGATAAAATTGACAGATACCATTCAGCCATTGATTCCTTATATTTTGATTCTCATCATTGACTTAGTGGTCATGGCCTTCTGGCCCTGGCTGGTTTTGATTCTTCCCACTGTCTTCAAACTGTGA
PROTEIN sequence
Length: 304
MIRAGYTPPRASAIVAAATGMGMMIPPCLNMVVLGAMTNISIAGLFMGGFLPGFLMAMTLMVIIYIQSSRGTLPGAEGKRSPFKEILTSFKDSIIPLMMPVIIFGGIFGGVFTATEAASVATVYAFIISVFVYKEIKGRALFRILVDTAVMTGVVCLLVGAATGFSWILATHQVPQILGTFIGSISEGRVIFLLMSIAVFLFFGMILDGLPAILIFFPILFPIALSLGIHPLHFGVLVIAIVGISIVAPPVGLCLVIICSIARIKLTDTIQPLIPYILILIIDLVVMAFWPWLVLILPTVFKL*