ggKbase home page

PLM4_90_b1_sep16_scaffold_12320_4

Organism: PLM4_90_b1_sep16_Deltaproteobacteria_48_13

near complete RP 45 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 10 / 38
Location: comp(3520..4557)

Top 3 Functional Annotations

Value Algorithm Source
D-alanine--D-alanine ligase (EC:6.3.2.4); K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] bin=bin5_DeltaP species=Dehalococcoides mccartyi genus=Dehalococcoides taxon_order=Dehalococcoidales taxon_class=Dehalococcoidia phylum=Chloroflexi tax=bin5_DeltaP organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 52.9
  • Coverage: 327.0
  • Bit_score: 332
  • Evalue 2.80e-88
ddl; D-alanine--D-alanine ligase (EC:6.3.2.4) similarity KEGG
DB: KEGG
  • Identity: 45.6
  • Coverage: 333.0
  • Bit_score: 294
  • Evalue 2.40e-77
Tax=RBG_16_Deltaproteobacteria_47_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 94.5
  • Coverage: 345.0
  • Bit_score: 655
  • Evalue 3.50e-185

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Deltaproteobacteria_47_11_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1038
ATGCCTGTCCTGCCTAGCGCTGGCAGGAATGTTCTGAAGATGAAATTGAAAGTCGGCATTACCTATAACCTCAAGAAAGATTTTACTCGACAAGAAAATCAGCCGATCGATCTTCTGGAGGAGTTCGATTCCGAGGAAACGGTGGATGCCATTCGCAAGGCCCTGGAGAGCGAAGGGCACGAAGTGATCAAACTGGGTGGAGACACCGGTTTGATCGATCGGTTAAGGCAGTCATCGGTCGATATCGTTTTCAACATCGCAGAAGGGTTTCAGGGGCGAAACCGAGAGGCCCACATCCCAGCTCTCTTAGAATTTTTGAACATCCCCTATACTGGGTCTGATCCCCTCACCCTCTCCCTCACCTTGGATAAGGCCATGGCAAAGAGAATCGTCATGAGCCAAGAGGTTCCGACTCCAAGATTTAAAAAAGTGGAGAGGATGGAGGATCTCGACGATCTAGACCTTCGTTACCCTCTCTTCGTCAAACTGTGTTATGAAGGGTCGAGCAAGGGGGTTCGGTTAGATTCAAAAATTTTGGATCCTCAAACCTTGAGAGAAAAAGCCGGAGGACTCTTCGAAACTTATGGTTCTCCCCTCCTCGTAGAGGAATTTGTGAGAGGCCCGGAGTTCACGGTGGGTATTCTCGGCAACGAAGCTCCTCGGGTCCTCGGCGTCATGCAGATTGAGATCAAGGGAAGACCTCCAGAAGAATCCATTTACTCTTTGGAGATCAAACGGGAGTGGGAAGAGAAAGTACGATACCATTGTCCCCCCGCCATCGACCCAAGTCTTTTGAAAAAGATCGAGGAGGTGGCCCTCCGGTCTTATCGAGCGTTAGAGTGCCGAGACGTCTCCCGGGTGGACATCCGAGTCGGGGAGGACCAGACGCCGTACTTTTTAGAGATCAATCCCCTTCCAGGCCTTTCTCCAGTTTACGGAGACCTCGTGATCATGGCAAGGAGCATGGGATGGGATTATGCCGAGCTGGTCAAAACCATTCTCCACCATGCCCTGAAGCGATATGGATGGATAGAATAA
PROTEIN sequence
Length: 346
MPVLPSAGRNVLKMKLKVGITYNLKKDFTRQENQPIDLLEEFDSEETVDAIRKALESEGHEVIKLGGDTGLIDRLRQSSVDIVFNIAEGFQGRNREAHIPALLEFLNIPYTGSDPLTLSLTLDKAMAKRIVMSQEVPTPRFKKVERMEDLDDLDLRYPLFVKLCYEGSSKGVRLDSKILDPQTLREKAGGLFETYGSPLLVEEFVRGPEFTVGILGNEAPRVLGVMQIEIKGRPPEESIYSLEIKREWEEKVRYHCPPAIDPSLLKKIEEVALRSYRALECRDVSRVDIRVGEDQTPYFLEINPLPGLSPVYGDLVIMARSMGWDYAELVKTILHHALKRYGWIE*