ggKbase home page

PLM4_90_b1_sep16_scaffold_2896_6

Organism: PLM4_90_b1_sep16_Deltaproteobacteria_45_7

near complete RP 37 / 55 MC: 1 BSCG 41 / 51 MC: 1 ASCG 11 / 38
Location: comp(5553..5927)

Top 3 Functional Annotations

Value Algorithm Source
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase (EC:6.3.2.-) similarity KEGG
DB: KEGG
  • Identity: 53.1
  • Coverage: 128.0
  • Bit_score: 126
  • Evalue 4.10e-27
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 53.4
  • Coverage: 118.0
  • Bit_score: 133
  • Evalue 1.20e-28
Tax=CG_Delta_05 similarity UNIPROT
DB: UniProtKB
  • Identity: 62.3
  • Coverage: 122.0
  • Bit_score: 158
  • Evalue 4.80e-36

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CG_Delta_05 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 375
ATGGGGAGGGTATTTCATGGCGTATCAACAGATTCGAGACAAATCCGATCGGGAAATCTTTATATACCTCTCAAAGGAGAAAAATTTGACGGTCATGATTTTATTGCCGACGCCATAAGAGATGGGGCTGGCGGCTTCCTCGTCCAGAAGGATTCGAAAAAAAGAATAAACCAGGCGTTTGAAAATGCAACCATCATCGGCGTTGAGGATACCTTGAAGGCCCTCGGGGATATAGCCCGTTTCTGGCGAAAGAAAAGCAAGGCTACCGTCGTTGCCATCACAGGAAGTTCCGGGAAAACAACCACGAAGGAAATGGTGGCGTGTATTGCCGGGCTGAAAAAGAAAGTACTCAAGGCACAGGGGAATTTTCTCTGA
PROTEIN sequence
Length: 125
MGRVFHGVSTDSRQIRSGNLYIPLKGEKFDGHDFIADAIRDGAGGFLVQKDSKKRINQAFENATIIGVEDTLKALGDIARFWRKKSKATVVAITGSSGKTTTKEMVACIAGLKKKVLKAQGNFL*