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PLM0_60_b1_sep16_scaffold_20544_5

Organism: PLM0_60_b1_sep16_Gemmatimonadetes_KBS708_61_15

near complete RP 41 / 55 MC: 4 BSCG 43 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: 4039..4413

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5K6_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 82.7
  • Coverage: 98.0
  • Bit_score: 179
  • Evalue 1.10e-42
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 82.7
  • Coverage: 98.0
  • Bit_score: 179
  • Evalue 3.20e-43
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:BAH37516.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.7
  • Coverage: 98.0
  • Bit_score: 179
  • Evalue 1.60e-42

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Taxonomy

Gemmatimonas aurantiaca → Gemmatimonas → Gemmatimonadales → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 375
ATGACAGCCACACCGCTGCAAAATCAGGGTGCCCAAACATTGGGCGCGGGGAGCTCGACGCCGGATGCTGCGGCGCCGGTAATCGATGCTGATCAGGAGATCATTTCCAAGGTTCTGGCGGGTCACAAGGATTCGTTCGGCATTCTGATAACCCGCTACAGCGATCCGTTGTACCGACATGCACTTGGGATGACAGGAAGTCCGGATGTGGCGGAAGACATACTCCAAGCGTCATTTATTAAAGCCTATCAGCATTTGGGCGAAGTTCGCGGCCGGTTCGACGCGTGGGTTTTTCGAATCGTCGCCAACTCGTGTAAGGATTGGCTGAAGAACATTCGGCGGACGCACGTGAGTTATGACGAGGACGATCAGCCC
PROTEIN sequence
Length: 125
MTATPLQNQGAQTLGAGSSTPDAAAPVIDADQEIISKVLAGHKDSFGILITRYSDPLYRHALGMTGSPDVAEDILQASFIKAYQHLGEVRGRFDAWVFRIVANSCKDWLKNIRRTHVSYDEDDQP