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PLM3_60_b1_sep16_scaffold_7257_2

Organism: PLM3_60_b1_sep16_Nitrospirae_58_7

near complete RP 46 / 55 MC: 1 BSCG 46 / 51 ASCG 14 / 38
Location: 259..2058

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA Tax=Candidatus Nitrospira defluvii RepID=D8PBZ3_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 81.2
  • Coverage: 601.0
  • Bit_score: 953
  • Evalue 7.70e-275
rpoD; RNA polymerase sigma factor RpoD (Sigma-70) similarity KEGG
DB: KEGG
  • Identity: 81.2
  • Coverage: 601.0
  • Bit_score: 953
  • Evalue 2.20e-275
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.2
  • Coverage: 601.0
  • Bit_score: 953
  • Evalue 1.10e-274

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Taxonomy

Candidatus Nitrospira defluvii → Nitrospira → Nitrospirales → Nitrospira → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 1800
ATGCCGAAAGACCAATTGCTCGGCGAAGTCAAGAAACTCATCTCCCTTGGGAAGGAGAAGGGCTTCCTGACGTACGAAGAGCTGAACAGCGCCTTGCCTGCTGAGATGGTTTCGTCCGAGCAGCTCGGCAACCTCATGACCATGTTCGGCGAGATGGACATTGAGATCATCGATTCTGCTGAGGGTGAGCGCTTTCAGAAGGCGGCTGACGGTGAGGAGGCCGTGGAGGAAATCGCAGAGAGCGAGGTGCTGGAGGAGGGGGAAAAGGAAATCGATCTGACTCCTGGGGTGCTCAGCCGGACCGATGATCCTGTCCGGCTGTATCTGAAGGAGATGGGCAGCGTCGCCCTGCTGAGTCGAGAGGGCGAGATCGAGATCGCCAAGCGCATCGAGGAAGGGAAAAAGGACATCTCCTCCGTCGTCTACGGGATGCCGATGACCATCGAGTTTATCCTCTCGCTGAGGGACAAGCTCAAGGCGGGGAAAATCACCGTGCGCGAGCTTGTGCCGGTCGCTGACGAGGAATTCGAGGAAGAGGCGGTGGAACGCGACGACGAGGAGCTCCGTCAGCGGACTCTTGAGGCGCTCAACGGCGTCCGCAAACTTTCGACCTCCCTCATGGGACTGCATGAGAAGAGCCGGCATCTCGGCAGCGATCCTGCCAGACAGCGTCGAGTCAAGCATCAGCTCGAACAGATCCGGCAGCAGGTGGTTGAGAAAATCGAGTTGGTCAACCTCCATATGGTCTTGAAAGACCGGATGGTGAAACGGGTCAGGGATCTTGCTCAAGAGATCCGCACCGCGGAGCGGGAAAGCTCACACTGTCAACGGAAACTGGGGGTACCGGGTGAAGCCGGCATGGACCTGTTGCGGCGGTTAGGCCGCAGTCGCCGCGATCTGCTCGCGGTGCGTCGTAAGACCGGCCTTTCCGAGGATACCCTTCACCAAATCAAGAAGGCGTTTCAGGCAGCCAGGAGCCGAATTCGGCAGCTCGAGACCGACGAGGCCAGGACCTCCGCCGAGGAGATCAAGGAAGCAGTCCGTCACCTCGACCTGGCCGAGGAGAAGGTGAAGCGCGGGAAGGCGGAACTGGTCGAAGCGAACCTGCGGCTGGTCGTCAGCATTGCCAAAAAGTACACCAACCGGGGGCTGCAGTTTCTGGACCTGATTCAGGAAGGCAACATCGGCCTCATGAAGGCGGTGGACAAGTTCGAATATAAACGGGGCTACAAGTTCAGCACCTATGCCACCTGGTGGATCAGACAGGCCATCACCCGCGCGATTGCTGACCAGGCGAGGACGATCCGCATCCCGGTCCACATGATCGAAACGATCAACAAGCTGATCAGGACCTCGCGCCATCTGGTTCAGAAGCTTGGGCGGGAGCCGACTCCCGAGGAGATCGCCGAGCGCATGGATCTGCCGCTGGACAAGGTTCGCAAGATTCTGAAAATCGCTCGGGAACCGATTTCGCTCGAGACCCCGATCGGAGAGGAGGAGGACAGCCATCTCGGCGACTTCATCGAGGACAAAAAAGCGATTTCTCCTCTCGAGGCGGCGATTCGGTACGATCTCCAACGCCAGATCAACAGCTCGCTGGAGACCCTCACGCCTCGTGAGGAAAAGGTGCTGAGGAAGCGGTTTGGGATCGGAGAGAGTACCGATCACACGTTGGAGGAAGTCGGTCAGGACTTCGAAGTGACTCGTGAGCGGATCAGGCAGATCGAAGCCAAGGCCCTGAGGAAGCTGCGCCATCCGAGCCGCAGCAAAAAACTCAGGAGTTTCGTCGAGAGCCTCTGA
PROTEIN sequence
Length: 600
MPKDQLLGEVKKLISLGKEKGFLTYEELNSALPAEMVSSEQLGNLMTMFGEMDIEIIDSAEGERFQKAADGEEAVEEIAESEVLEEGEKEIDLTPGVLSRTDDPVRLYLKEMGSVALLSREGEIEIAKRIEEGKKDISSVVYGMPMTIEFILSLRDKLKAGKITVRELVPVADEEFEEEAVERDDEELRQRTLEALNGVRKLSTSLMGLHEKSRHLGSDPARQRRVKHQLEQIRQQVVEKIELVNLHMVLKDRMVKRVRDLAQEIRTAERESSHCQRKLGVPGEAGMDLLRRLGRSRRDLLAVRRKTGLSEDTLHQIKKAFQAARSRIRQLETDEARTSAEEIKEAVRHLDLAEEKVKRGKAELVEANLRLVVSIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYKRGYKFSTYATWWIRQAITRAIADQARTIRIPVHMIETINKLIRTSRHLVQKLGREPTPEEIAERMDLPLDKVRKILKIAREPISLETPIGEEEDSHLGDFIEDKKAISPLEAAIRYDLQRQINSSLETLTPREEKVLRKRFGIGESTDHTLEEVGQDFEVTRERIRQIEAKALRKLRHPSRSKKLRSFVESL*