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PLM3_60_b1_sep16_scaffold_15834_2

Organism: PLM3_60_b1_sep16_Nitrospirae_58_7

near complete RP 46 / 55 MC: 1 BSCG 46 / 51 ASCG 14 / 38
Location: 381..965

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 region 2 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q139T9_RHOPS similarity UNIREF
DB: UNIREF100
  • Identity: 42.8
  • Coverage: 180.0
  • Bit_score: 152
  • Evalue 3.90e-34
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 42.8
  • Coverage: 180.0
  • Bit_score: 152
  • Evalue 1.10e-34
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 46.8
  • Coverage: 173.0
  • Bit_score: 169
  • Evalue 2.50e-39

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Taxonomy

RLO_Deltaproteobacteria_60_19 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 585
ATGATGGACACGGGCGACCCATCGCGTGAGTCGCGAGACACCGACGAGGCCCTTCTTGCCGGGATCGTACGAGGCGACGAGCTGGCCTTCGAAACCCTCTTTCGGAGTTATCAGCGGCGCCTCTTCCGGTACCTGGTGGGCTTGGTGCGCAACGGTGCGGTCACAGAGGAGCTGGTGTGCGAGACGATGACTGAGGTCTGGCGGAATGCCCGAACCTTCCAAGGTCGCTCCCGGGTCTCCACCTGGATCTTCGGGATCGCGTCGAATAAGGCAAAAACGGCGCTGCGCCGCCTGCAAAACCAAGAAGCCGACCCGGAGCTTGTCCTGCAACTGGAGGATCCGAACCCGGGGCCTGCAGACGAGATCGCCCGCCAGGAGCTGGCCGGTCAGGTCAGAGCCGCCCTCGAGCATCTTACTCCGGAGCATCGCCAGGTCGTGGAGCTGACCTTCATGCATGGCTTCTCCTACCAGGAGATCGCGACAATCGTCGGCTGCCCGGTCAATACCGTGAAGACCCGCATGTTCCACGCGAAGCGACGCCTGCGCGAGGCGCTGGGGGGCATTTTCTCCGGGAGGGTGCCATGA
PROTEIN sequence
Length: 195
MMDTGDPSRESRDTDEALLAGIVRGDELAFETLFRSYQRRLFRYLVGLVRNGAVTEELVCETMTEVWRNARTFQGRSRVSTWIFGIASNKAKTALRRLQNQEADPELVLQLEDPNPGPADEIARQELAGQVRAALEHLTPEHRQVVELTFMHGFSYQEIATIVGCPVNTVKTRMFHAKRRLREALGGIFSGRVP*