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PLM3_60_b1_sep16_scaffold_4762

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_b1_sep16_scaffold_4762_1
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(3..956)
DNA (954bp) protein (318aa)
sulfatase; K01130 arylsulfatase [EC:3.1.6.1] bin=bin1_lowGC species=Methylobacter marinus genus=Methylobacter taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
sulfatase
Tax=CSP1_2_Dadabacteria
PLM3_60_b1_sep16_scaffold_4762_2
BJP_IG2069_Syntrophobacterales_47_18, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1225..3195)
DNA (1971bp) protein (657aa)
Transcriptional regulator, Fis family Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1AL12_PELPD
Fis family transcriptional regulator
Tax=BJP_IG2069_Syntrophobacterales_47_18
PLM3_60_b1_sep16_scaffold_4762_3
BJP_IG2069_Syntrophobacterales_47_18, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3321..4145)
DNA (825bp) protein (275aa)
Transcriptional regulator, Fis family Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1AL12_PELPD
Fis family transcriptional regulator
Tax=BJP_IG2069_Syntrophobacterales_47_18
PLM3_60_b1_sep16_scaffold_4762_4
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4175..5491)
DNA (1317bp) protein (439aa)
Transcriptional regulator, NifA subfamily, Fis Family Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G4X7_GEOUR
NifA subfamily transcriptional regulator
Transcriptional regulator, NifA subfamily, Fis Family {ECO:0000313|EMBL:ABQ26845.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM3_60_b1_sep16_scaffold_4762_5
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5567..6313)
DNA (747bp) protein (249aa)
Uncharacterized protein {ECO:0000313|EMBL:KJS03250.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbaceae bacterium BRH_c16a.;"
PLM3_60_b1_sep16_scaffold_4762_6
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6310..7122)
DNA (813bp) protein (271aa)
hypothetical protein bin=bin1_lowGC species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
Uncharacterized protein {ECO:0000313|EMBL:KFA86818.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
Protein of unknown function DUF2092, periplasmic
PLM3_60_b1_sep16_scaffold_4762_7
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7173..7577)
DNA (405bp) protein (135aa)
Antibiotic biosynthesis monooxygenase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G4X6_GEOUR
antibiotic biosynthesis monooxygenase
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:ABQ26844.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM3_60_b1_sep16_scaffold_4762_8
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

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7732..8004
DNA (273bp) protein (91aa)
Prevent-host-death protein bin=GWC2_Methylomirabilis_70_16 species=Xenococcus sp. PCC 7305 genus=Xenococcus taxon_order=Pleurocapsales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
prevent-host-death family protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
PLM3_60_b1_sep16_scaffold_4762_9
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

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8049..8393
DNA (345bp) protein (115aa)
PilT protein domain protein bin=GWA2_Elusimicrobia_69_24 species=Microcoleus vaginatus genus=Microcoleus taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
PLM3_60_b1_sep16_scaffold_4762_10
Burkholderia sacchari, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8457..9884
DNA (1428bp) protein (476aa)
hypothetical protein Tax=Burkholderia sp. JPY251 RepID=UPI00037BB0F3
Uncharacterized protein {ECO:0000313|EMBL:KHD20242.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sacchari.;"
hypothetical protein
PLM3_60_b1_sep16_scaffold_4762_11
Microcoleus vaginatus, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(9930..10367)
DNA (438bp) protein (146aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus vaginatus FGP-2.;"
Ribonuclease VapC Tax=Microcoleus vaginatus FGP-2 RepID=F5ULH5_9CYAN
PilT protein domain-containing protein
PLM3_60_b1_sep16_scaffold_4762_12
RLO_Nitrospirae_42_9, Nitrospirae, Bacteria

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comp(10364..10645)
DNA (282bp) protein (94aa)
Transcriptional regulator, AbrB family bin=GWC2_Nitrospirae_57_13 species=unknown genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
hypothetical protein
Tax=RifCSPlowO2_12_Nitrospirae_42_9_curated
PLM3_60_b1_sep16_scaffold_4762_13
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10791..11561)
DNA (771bp) protein (257aa)
hypothetical protein Tax=Lamprocystis purpurea RepID=UPI00037F8496
Uncharacterized protein {ECO:0000313|EMBL:CDH45911.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
hypothetical protein
PLM3_60_b1_sep16_scaffold_4762_14
Nitrosococcus watsonii, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11673..12680)
DNA (1008bp) protein (336aa)
Neurotransmitter-gated ion-channel ligand-binding protein Tax=Nitrosococcus watsoni (strain C-113) RepID=D8K493_NITWC
neurotransmitter-gated ion-channel ligand-binding protein
Neurotransmitter-gated ion-channel ligand-binding protein {ECO:0000313|EMBL:ADJ27790.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus watsoni (strain C-113).;"
PLM3_60_b1_sep16_scaffold_4762_15
Enterobacter lignolyticus, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12778..13647)
DNA (870bp) protein (290aa)
Peptidoglycan lytic exotransglycosylase {ECO:0000256|SAAS:SAAS00166192}; EC=4.2.2.n1 {ECO:0000256|SAAS:SAAS00166192};; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter lignolyticus (strain SCF1).;"
Lytic transglycosylase catalytic Tax=Enterobacter lignolyticus (strain SCF1) RepID=E3G2C1_ENTLS
lytic transglycosylase
Displaying 15 items

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