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PLM3_60_coex_sep16_scaffold_35_15

Organism: PLM3_60_coex_sep16_Magnetospirillum_magneticum_63_15

near complete RP 47 / 55 MC: 2 BSCG 47 / 51 ASCG 10 / 38 MC: 1
Location: 17447..18952

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase factor sigma-54 (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 52.7
  • Coverage: 509.0
  • Bit_score: 493
  • Evalue 6.80e-137
RNA polymerase sigma-54 factor Tax=alpha proteobacterium BAL199 RepID=A8TSN6_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 51.8
  • Coverage: 519.0
  • Bit_score: 506
  • Evalue 1.60e-140
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 54.0
  • Coverage: 515.0
  • Bit_score: 513
  • Evalue 3.10e-142

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Taxonomy

RLO_Rhodospirillales_67_15 → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1506
ATGGCGATGAAGCCACGGCTTGATCTGAGGCAGGCGCAGACGCTGACGCTGACGCCGCAACTGCAGCAGGCGATCAAGCTGCTTGCCCTTTCGAGCCAGGAACTCACCGCTTACATCGAGACCGAGTTGGAGCAGAATCCCCTGCTGGAGCGGGACGAAACCTCCGACGATGATCCGCGCGGGCCCGATACCGACGGCGTGGGAGCGGGCAGCGCCGCCGCGGAGGCGGCGCCGGACGATCTTTTGCGTGGGCTCGATTCCGGCAAGTTCAGCGAGGAAGGCGAGGCCGCCGGCGACGAAGAAAGCGAGCTTTGGCCGGTCGAACCGGCCGATAGCGACATGACCTTGCGCCTGGATATGCGCATGTCCGGCGAGGATGGCGGCGCCGGCGGCGCGCTCGACAGCGATCTCAGGGACATCGCCAATCTGCGCGATCACCTGCTGGCGCAGTTGAGCGTCGACCTGGCGGACCCGATGGATCGCCTGATCGGCCTGCATCTGATCGGGTCGCTGGATGACGCCGGCTATGTCACCACCGACCTCCAGACCATCGCGGATCAACTCGGCTGCGATCTGCTGCGCATCGAGGCGACGCTGACGCGGCTGCAGGCCTTCGATCCGCCGGGGGTTTTTGCCCGCGACCTGGCCGAATGCCTGGCGCTGCAGCTGCGGGACCGGGACCGCCTCGATCCCGCCATGGCCTGCCTGCTGCAGCATCTGGATCTGCTGGCGCGGGGCGAGCAGGCCAAGCTGATGAAGCTATGCGGCGTCGACAGCGAGGATCTGCGGGACATGGTAGCGGAGATCAGGTCCCTCAGTCCGAAACCCGGCGAATCCTTTTCCGACAATGCGGCGCCGCCGGTGACGCCGGATGTGATCGTGCGGCGCGCCGCCGACGGTGGCTGGCATGTGGAGCTCAATCCCGGCAGCCTGCCGCGTGTCCTCGTCAACAACACCTATGCGGCGACGCTGAAAGCCAATACCCGCGACCGCGAAGCGCGGCGCTATATCAGCGACCGCATCGATGCCGCCAACTGGCTGGTGCGCGCGCTGCAGCAGCGCGCGACGACCATCCTGAAAGTGGCGACCGAAATCGTCGCCCATCAGAGCGAGTTTTTCGAACGGGGCATCCGCCATCTGAGACCGCTGACGCGCCGCGAGGTCGCCGACGCGATCTCCATGCATGAGAGCACCGTCAGCCGGGTGACCGCGAACAAGTTCATGACCACGCCCCGCGGCCTTTATGAGATGAAATACTTCTTCAGCAATGCGGTTGGCGACACCGCCACCGGCGAGAGCCATGCCGCCGAGGCGGTCCGCCGCCGAATCAAGCAGATGATCGATAACGAGCCGGTGGATGGCGTACTGTCGGACGACGAGCTGATGCAGAAACTGCGGGGGCAGGGCATCGAAATCGCCCGGCGGACCGTAGCTAAATATCGAGAATCATTGAGAATTCCAACTTCGTCCCAACGCCGCCGGCAGAAGGCATTGCAGCCGCGCTAG
PROTEIN sequence
Length: 502
MAMKPRLDLRQAQTLTLTPQLQQAIKLLALSSQELTAYIETELEQNPLLERDETSDDDPRGPDTDGVGAGSAAAEAAPDDLLRGLDSGKFSEEGEAAGDEESELWPVEPADSDMTLRLDMRMSGEDGGAGGALDSDLRDIANLRDHLLAQLSVDLADPMDRLIGLHLIGSLDDAGYVTTDLQTIADQLGCDLLRIEATLTRLQAFDPPGVFARDLAECLALQLRDRDRLDPAMACLLQHLDLLARGEQAKLMKLCGVDSEDLRDMVAEIRSLSPKPGESFSDNAAPPVTPDVIVRRAADGGWHVELNPGSLPRVLVNNTYAATLKANTRDREARRYISDRIDAANWLVRALQQRATTILKVATEIVAHQSEFFERGIRHLRPLTRREVADAISMHESTVSRVTANKFMTTPRGLYEMKYFFSNAVGDTATGESHAAEAVRRRIKQMIDNEPVDGVLSDDELMQKLRGQGIEIARRTVAKYRESLRIPTSSQRRRQKALQPR*