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PLM3_60_coex_sep16_scaffold_8930_1

Organism: PLM3_60_coex_sep16_Aeromicrobium_marinum_64_8

near complete RP 48 / 55 MC: 2 BSCG 49 / 51 ASCG 12 / 38
Location: 3..251

Top 3 Functional Annotations

Value Algorithm Source
dapF; diaminopimelate epimerase (EC:5.1.1.7) similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 68.0
  • Bit_score: 64
  • Evalue 9.70e-09
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium freudenreichii subsp. freudenreichii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.0
  • Coverage: 68.0
  • Bit_score: 64
  • Evalue 4.80e-08
Diaminopimelate epimerase Tax=Propionibacterium freudenreichii subsp. shermanii (strain ATCC 9614 / CIP 103027 / CIRM-BIA1) RepID=D7GE64_PROFC similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 68.0
  • Bit_score: 64
  • Evalue 3.40e-08

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Taxonomy

Propionibacterium freudenreichii → Propionibacterium → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 249
TCCTGTGGCACCGGCACGGTCGCCGCCGCAGCGGCGACTCGCGTTCATGATCAGGATCTGACGCCACTGCCGGTGACCTATCGCGTCGATACGCCCGGAGGCAGCGTTGAAGTCGAGCTGACCGAGCACCAGGCTTACTTGACCGGGCCGGCAGTTCTGGTGGCGCATGGGGAGCTGGCCCTGCCGGAACGCTCAGTCCTCGAGACCCAAACTCACCCCGCCGCGTCAAGTTCTCCTCGGCCGGTCTAG
PROTEIN sequence
Length: 83
SCGTGTVAAAAATRVHDQDLTPLPVTYRVDTPGGSVEVELTEHQAYLTGPAVLVAHGELALPERSVLETQTHPAASSSPRPV*