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PLM3_60_coex_sep16_scaffold_19468_3

Organism: PLM3_60_coex_sep16_Aeromicrobium_marinum_64_8

near complete RP 48 / 55 MC: 2 BSCG 49 / 51 ASCG 12 / 38
Location: comp(1483..2688)

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase ECF-subfamily sigma factor Tax=Janibacter sp. HTCC2649 RepID=A3TR83_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 70.5
  • Coverage: 400.0
  • Bit_score: 548
  • Evalue 5.00e-153
RNA polymerase subunit sigma-24 {ECO:0000313|EMBL:KGN28815.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia flava TL1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.0
  • Coverage: 400.0
  • Bit_score: 559
  • Evalue 2.30e-156
sigma-70 region 2 domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 69.2
  • Coverage: 402.0
  • Bit_score: 529
  • Evalue 5.20e-148

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Taxonomy

Knoellia flava → Knoellia → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1206
TTGACGCACGTCGAGGAGGTCTTCCGCGCCGAGTACGGCCGGGTCGTCGCCGGGCTGGTACGCCGGTTCGGCGACATCGACATCGCCGAGGAGGCACTCGCCGACGCGCTGGTCATCGCTCTCGAGCGGTGGCCGCGCGACGGCGTACCTCCCAACCCGGCGGCCTGGCTGACCCGGGTCGCTGGTAACAAGGCGATCGACCGGCTGCGCCGCGAGAAGGTCCGCGACGAGAAGTACGCCGAGGCTGCCATGCTCCAGGACGACACCCCTGCCGAATCCACCGGACCGGTGACGGACGACCGGCTCCGGCTCATCTTCACGTGCTGCCACCCAGCGCTCGCACCCGAGAACCGGATCGCGCTCACGCTACGGCTGCTGGGCGGCCTCACGGTCGCGGAGATCGCCCACGCGTTCCTCGTGCCGGAGACGACGATGGCCCAGCGGATCACCCGTGCGAAGGGGAAGATCAAGCAGGCGCGGATCCCCTACCGGGTGCCCATGGGCGACGACCTCCCGAACCGGATGGCCGGGGTCCTCGCCGTCCTCTACCTGATCTTCAACGAGGGCTACCTGTCCACGACCGCCGCGTCGGTGCGCGAGGACCTCTGCACCGAGGCGATCCGGCTGACCCGGCAGCTGCGTGAGGCCAGCGCCTCTCTCGGGGCGCAGCCGGAGGTGCTCGGGCTGCTCGCGCTCATGCTGCTGTTGGACGCCCGGCGCCCGGCCCGGGTGCGCGACGGCGTACTCGTCGCTTTGCCCGACCAGGACCGCTCCGCCTGGAACTCCGATCAGATCGAGGAGGGGCATGCGCTGGTCCGCCAGTGTCTCGCCCTGAACCGGCCCGGGCCCTACCAGATCCAAGCGGCGATCAACGCGGTGCACACCGACGCACCCGACGCGTCGTCGGTCGACTGGTCGCAGGTGGTGGCGCTGTACAACCAGCTGGCGGCGCTCACGCCGTCACCGATCGTCGCGCTGAACCGCGCGGTCGCCGTGGCCGAGCTCGACGGACCGCAGGTGGCCCTGGCCATCGTCGACGACCTGGACCTCGGCTCGTACCACGCGTTCCACGCCACCCGCGCCGACCTGCTCCGCCGGCTCGGCCGTTACAACGAAGCACGTGAGGCCTACGGTCAGGCGATCGCGCTGACCGAGAACGAGGCCGAGCGGGCCTGGCTCGCCGGCCGTCAGGCTTCGTGCGGGTAG
PROTEIN sequence
Length: 402
LTHVEEVFRAEYGRVVAGLVRRFGDIDIAEEALADALVIALERWPRDGVPPNPAAWLTRVAGNKAIDRLRREKVRDEKYAEAAMLQDDTPAESTGPVTDDRLRLIFTCCHPALAPENRIALTLRLLGGLTVAEIAHAFLVPETTMAQRITRAKGKIKQARIPYRVPMGDDLPNRMAGVLAVLYLIFNEGYLSTTAASVREDLCTEAIRLTRQLREASASLGAQPEVLGLLALMLLLDARRPARVRDGVLVALPDQDRSAWNSDQIEEGHALVRQCLALNRPGPYQIQAAINAVHTDAPDASSVDWSQVVALYNQLAALTPSPIVALNRAVAVAELDGPQVALAIVDDLDLGSYHAFHATRADLLRRLGRYNEAREAYGQAIALTENEAERAWLAGRQASCG*