ggKbase home page

PLM3_60_coex_sep16_scaffold_4400_1

Organism: PLM3_60_coex_sep16_Deltaproteobacteria_56_6

near complete RP 47 / 55 MC: 4 BSCG 48 / 51 MC: 2 ASCG 9 / 38 MC: 2
Location: comp(25..1530)

Top 3 Functional Annotations

Value Algorithm Source
lysS; lysine--tRNA ligase (EC:6.1.1.6) similarity KEGG
DB: KEGG
  • Identity: 62.1
  • Coverage: 493.0
  • Bit_score: 619
  • Evalue 6.30e-175
Lysine--tRNA ligase bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 70.4
  • Coverage: 493.0
  • Bit_score: 712
  • Evalue 2.50e-202
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 72.0
  • Coverage: 493.0
  • Bit_score: 729
  • Evalue 2.80e-207

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Deltaproteobacteria_60_19 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1506
ATGGCCGATAGTGAAAATAGTCTAGTCGACGACAGCGGCGAACAAGTCGACGTGCGGCGGGCAAAGCTCGCTAAACTGCGCGACGCGGGGAAAAACCCGTATCCCAACGATTTTAAGCCGTCCCATTCAATTGTCGACGCGATGGCGCTCGCCGCCGACGTGGGCGACGAAGACTTGCACCAAACACGACGGGTGGTTGGTGTCGCCGGGCGGATCATGGCGCTTCGCCGCATGGGCAAGGCGTCGTTCTTTCACATTCAAGATCGGCGCGGCAAATTGCAGGCCTACGCGCGCAAGGATCGCTTGGGCGACGACGGTTACGCGCTGTTTCAGACCTTGGATATCGGCGACATCGTCGGTATCCGCGGCCATCTCTTTCGGACCAAGACCAAGGAATTGACCGTCGAGGCCCAAGAACTTCGCTTGCTGACCAAGTGTCTGAGACCATTGCCAGAAAAGTGGCATGGGCTCGCCGACGTGGAAGCGCGCTATCGGCAACGCTACGTCGACTTGATGGTCAATCCCGAAGTGCGCGAGGTGTTCGAGAAGCGTTCGCGCATCGTTCGGCTGTTGCGCCGGTTTTTCGAAGAGCGCGATTTTCTCGAAGTCGAGACGCCGATGATGCAGCCGATTCCCGGCGGCGCGGCGGCGAAGCCTTTCATCACGCATCACAATGCCCTCGACATGGAACTCTACTTGAGGGTTGCCCCCGAGTTATTTCTCAAGCGCTTGCTAGTCGGCGGCTTCGAGCGCGTCTTCGAGCTCAACCGTAGCTTTCGTAACGAAGGGATTTCGGTCAGGCATAATCCGGAATTTACCATGGTCGAGTTCTACCAGGCTTATGCGACCTTCGATGATTTGATGCAGCTCACCGAGGAACTGTTCGTCGCGTTGGCGCAAGAAGTTGCCGGTTCGTTGCAGCTGCCCTATGGCGAGCATGCGATCGATTTGACGCCGCCGTGGCGCCGCTTGACGATTCGCGAAGCGGTTATTGCGCATGGCGGCGCGACTGAAACGGATGTCGATTCGGTCGATGGACTGCAAGGGTTTGCCAAGAAACATAATTTGAAGGTGGATTTGAACGCGCCGTACGGCAAGGTCTTGGTGGAAATTTTTGAAGAAGTCGCCGAAGCAAGATTGATTCAGCCTACTTTCATGACCGGTTATCCCATCGAAGTGTCGCCCTTGGCGCGTAAAAACGACACGGCTCCCGCGATGGTGGACCGCTTCGAGCTCTACATCGGCGGCCGCGAGCTGGCCAATGCGTTTTCCGAGCTTAACGATCCCACCGATCAGCGCCAGCGTTTCTTGGAACAAATGGCTGCCCGCGCCGCCGGCGACGAAGAGGCCAATCCGATCGATGACGATTATGTGCGCGCGCTCGAATACGGCATGCCGCCGGCCGCTGGTGAGGGCATCGGTATCGACCGGCTGGTGATGTTCCTGACCAATTCGCCGTCGATCCGCGACGTGATTCTCTTTCCGTTGCTGCGCCCGCATCGCTAG
PROTEIN sequence
Length: 502
MADSENSLVDDSGEQVDVRRAKLAKLRDAGKNPYPNDFKPSHSIVDAMALAADVGDEDLHQTRRVVGVAGRIMALRRMGKASFFHIQDRRGKLQAYARKDRLGDDGYALFQTLDIGDIVGIRGHLFRTKTKELTVEAQELRLLTKCLRPLPEKWHGLADVEARYRQRYVDLMVNPEVREVFEKRSRIVRLLRRFFEERDFLEVETPMMQPIPGGAAAKPFITHHNALDMELYLRVAPELFLKRLLVGGFERVFELNRSFRNEGISVRHNPEFTMVEFYQAYATFDDLMQLTEELFVALAQEVAGSLQLPYGEHAIDLTPPWRRLTIREAVIAHGGATETDVDSVDGLQGFAKKHNLKVDLNAPYGKVLVEIFEEVAEARLIQPTFMTGYPIEVSPLARKNDTAPAMVDRFELYIGGRELANAFSELNDPTDQRQRFLEQMAARAAGDEEANPIDDDYVRALEYGMPPAAGEGIGIDRLVMFLTNSPSIRDVILFPLLRPHR*