ggKbase home page

PLM3_60_coex_sep16_scaffold_13059_7

Organism: PLM3_60_coex_sep16_Deltaproteobacteria_56_6

near complete RP 47 / 55 MC: 4 BSCG 48 / 51 MC: 2 ASCG 9 / 38 MC: 2
Location: comp(4557..5183)

Top 3 Functional Annotations

Value Algorithm Source
DNA-(apurinic or apyrimidinic site) lyase/endonuclease III (EC:3.2.2.- 4.2.99.18) similarity KEGG
DB: KEGG
  • Identity: 54.2
  • Coverage: 203.0
  • Bit_score: 228
  • Evalue 1.30e-57
Endonuclease III bin=GWD2_Deltaproteobacteria_55_8 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 71.2
  • Coverage: 205.0
  • Bit_score: 303
  • Evalue 1.50e-79
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 71.7
  • Coverage: 205.0
  • Bit_score: 306
  • Evalue 1.80e-80

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Deltaproteobacteria_57_22 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 627
ATGGACGTAAAAAAACTAATCGCGCGTCTGGAGAAAGTTCATCCCGACGCCAAGCTCGATCTCGACTTTAGCAATCCGCTGGAACTGCTCATCGCCCTCATCCTCGCCGCCCAAGCGCGCGACGATCTGGTCAACAAAGTGACGGTGGAGATGTTCAAAGCCAACCGCAGCGCTGCCGACTACGCCAACACGCCGCTGGCGAAACTCGAAAGCCAGATCGGTAAGATCAATTTCTACCGAAACAAAGCCAAGTCGATTCACAATTGCTGCAAACAACTGGTCGAGCGCTTTAACGGCAAAGTACCAGACAATCTGGAAGATCTAGTCAGCCTCTCCGGTGTCGGGCGAAAGACGGCGAATATCGTTCTCGGCAACGGCTTCGGCCAACAAGCGATCGGCGTCGACACCCACGTCATGCGCCTGTCACAGCGCCTCGGCTTCACGAAAAAAACCGACCCGGACAAGATCGAAGCCGACCTGACGGCGATCGTCCCGGAAAAACAACGCGTCCGCTTCTGCCACCTGATGCAGTACCACGGCCGCCGCGTCTGCCTCGCCAAAAAACCGAAATGCCCCGAGTGCACGATCAAAGATATTTGTCCGTATCCGGGGAAGACGAAAGAATAA
PROTEIN sequence
Length: 209
MDVKKLIARLEKVHPDAKLDLDFSNPLELLIALILAAQARDDLVNKVTVEMFKANRSAADYANTPLAKLESQIGKINFYRNKAKSIHNCCKQLVERFNGKVPDNLEDLVSLSGVGRKTANIVLGNGFGQQAIGVDTHVMRLSQRLGFTKKTDPDKIEADLTAIVPEKQRVRFCHLMQYHGRRVCLAKKPKCPECTIKDICPYPGKTKE*