ggKbase home page

PLM3_60_coex_sep16_scaffold_54605_2

Organism: PLM3_60_coex_sep16_Deltaproteobacteria_56_6

near complete RP 47 / 55 MC: 4 BSCG 48 / 51 MC: 2 ASCG 9 / 38 MC: 2
Location: comp(349..1194)

Top 3 Functional Annotations

Value Algorithm Source
Extracellular ligand-binding receptor Tax=Cupriavidus basilensis OR16 RepID=H1RXS7_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 69.8
  • Coverage: 281.0
  • Bit_score: 410
  • Evalue 1.10e-111
Benzoate transport, extracellular ligand-binding receptor similarity KEGG
DB: KEGG
  • Identity: 68.7
  • Coverage: 281.0
  • Bit_score: 405
  • Evalue 1.00e-110
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 72.2
  • Coverage: 281.0
  • Bit_score: 428
  • Evalue 4.40e-117

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 846
ATGGGGATGGTCAAGATCGCCAAGGAAACCAATACGCTGATGATCATACCCAACGCCGGGCTCGACGCCGCCACCGGCGCGCTCTGCGCGCCGAATATTTTCCGCTCGTCGTTTTCGAATTGGCAGCCGTCTTATCCGATGGGTAAGGTGCTCGCCGATCGTGGGATTCGTAACGTCGTGTCTCTCGCTTGGAAGTACGGCGCCGGTGAAGAAGCCGTCGCCGGCTTTACTGAAGGATTTATCAAAGCCGGCGGCAAATCAGTGCGCGGCTTGTGGATTCCCTTCCCTAACGCCGAATTCCAAGCCTTGCTCACAGAGATCGCCTCGGTCAAACCCGATGCCGTATTCGTATTTTTTGCCGGCGCCGGCGCCGCGAAATTCGTCAGAGACTACGCAGCCGCTGGTCTGCGAAACAAGATTCCGTTGTTCGGCTCTGGATTTCTAACTGATGGCATATTAGACGCCATCCAAGATTCGGCCCAGGGTCTAGAGACTACGTTGCACTATGCCGACGGCCTTAATACCAAGCGCGACAAAGAATTCCGCGCGGCCTACGCGAAATCATACACGATAGAACCGGATGTTTACGCAGTGCAAGGTTTCGATGCCGGTTTGCTGCTCGCCACCGGACTCGACGCGGTAAAAGGCGATATCACTAAACGCAAGGAAATGATCGCCGCCATGGAGAAAGCCAAGATCGACAGTCCGCGCGGCGCTTGGACCATGTCGAAAGCGCACAATCCGATCCAAGACATTTATCTTCGCAAAGTGGTCGGCAAAGAAAACCGTTTCGTCAGCGTCGCCCACAAAGCCCTCGCCGACCCAGCGCGGGGATGCAAATTATAG
PROTEIN sequence
Length: 282
MGMVKIAKETNTLMIIPNAGLDAATGALCAPNIFRSSFSNWQPSYPMGKVLADRGIRNVVSLAWKYGAGEEAVAGFTEGFIKAGGKSVRGLWIPFPNAEFQALLTEIASVKPDAVFVFFAGAGAAKFVRDYAAAGLRNKIPLFGSGFLTDGILDAIQDSAQGLETTLHYADGLNTKRDKEFRAAYAKSYTIEPDVYAVQGFDAGLLLATGLDAVKGDITKRKEMIAAMEKAKIDSPRGAWTMSKAHNPIQDIYLRKVVGKENRFVSVAHKALADPARGCKL*