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PLM3_60_coex_sep16_scaffold_3476_9

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_7

near complete RP 46 / 55 BSCG 45 / 51 MC: 2 ASCG 11 / 38 MC: 3
Location: 8904..9527

Top 3 Functional Annotations

Value Algorithm Source
Putative sensor with HAMP domain Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WHX4_ACTMD similarity UNIREF
DB: UNIREF100
  • Identity: 30.2
  • Coverage: 215.0
  • Bit_score: 63
  • Evalue 2.50e-07
sensor with HAMP domain similarity KEGG
DB: KEGG
  • Identity: 30.2
  • Coverage: 215.0
  • Bit_score: 63
  • Evalue 7.20e-08
Putative sensor with HAMP domain {ECO:0000313|EMBL:ACU34425.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 30.2
  • Coverage: 215.0
  • Bit_score: 63
  • Evalue 3.50e-07

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Taxonomy

Actinosynnema mirum → Actinosynnema → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 624
ATGGTGTGGCTGCCCGAGGCGTTGACCGTGCATGCGGCCGGCACGCCCGACGCCGTGGACGCCCCGCGCCGGGCCGAGCTGACCGCCCCAGGCCAGGGACCGGACCACGGCGAGGCAGCAGGCAACGACCTGCCGTTCTTCGAGGCGGCGCCGTCGGACTGGTTCGCGGGCGGCGGCGAGCTGGTGCACATGCCCCTGCGCCGCCACGGCACCGAGGGCGGCGGCGGCAACGGGCGCCCGCCCGTCGGGCTTCCCACCGGCTCCCAGGGCCGACAAGGGGCTGCGGCCACACCAGAGCGGGAGGTCGGCGGCCGCGGGTCGCGTCCACGCGGCTACGTGCCGTCGCCCCGCGCCGACGGCCTGCCCCCGGCACCGGCCGCGCCACCGGCGACCACCGGCGCGGGCCTGCCCCGCCGGGTCCCGCAGGCCAGCCTCGCCCCCGGCATCGTCGCCACCGGGCCCGGGACCGACCGGGGCGCGGGTGGTGGCATGGTCCCGCGCCGCACCCCGGACGACGTGCGGACGCTCCTGTCGAGCTACCGCTCGAGCGTGGAGCGCGGGCGCCACGAGGCGTCCACCGACGCCTACCGGTCCTCGGGGGACGACGATGACCAAGCCCAGTAG
PROTEIN sequence
Length: 208
MVWLPEALTVHAAGTPDAVDAPRRAELTAPGQGPDHGEAAGNDLPFFEAAPSDWFAGGGELVHMPLRRHGTEGGGGNGRPPVGLPTGSQGRQGAAATPEREVGGRGSRPRGYVPSPRADGLPPAPAAPPATTGAGLPRRVPQASLAPGIVATGPGTDRGAGGGMVPRRTPDDVRTLLSSYRSSVERGRHEASTDAYRSSGDDDDQAQ*