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PLM3_60_coex_sep16_scaffold_5200_13

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_7

near complete RP 46 / 55 BSCG 45 / 51 MC: 2 ASCG 11 / 38 MC: 3
Location: comp(11335..11868)

Top 3 Functional Annotations

Value Algorithm Source
glmZ(sRNA)-inactivating NTPase Tax=Streptomyces sp. HmicA12 RepID=UPI0003622B43 similarity UNIREF
DB: UNIREF100
  • Identity: 63.7
  • Coverage: 179.0
  • Bit_score: 225
  • Evalue 3.30e-56
Nucleotide-binding protein STVIR_6663 {ECO:0000256|HAMAP-Rule:MF_00636}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces viridochromogenes Tue57.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.7
  • Coverage: 179.0
  • Bit_score: 225
  • Evalue 4.60e-56
UPF0042 nucleotide-binding protein similarity KEGG
DB: KEGG
  • Identity: 63.7
  • Coverage: 179.0
  • Bit_score: 222
  • Evalue 7.90e-56

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Taxonomy

Streptomyces viridochromogenes → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 534
CACCCGGTGGCGGGGGAGCGGGTGGTGGAGTCGATCGCGCGGGAGCGCTCCCTGCTGCGGGACCTGCGCGCCACCGCCGACCTGGTGGTCGACACCAGCGACCTCAACGTGCACGAGCTGCGGGCCAAGATGCTGGCCGCGTTCGCCGGCGAGGAGACCGGCATGCTGGTCACCGTCTCCTCCTTCGGCTTCAAGTACGGCCTGCCGCTCGACGCCGACATGGTGGTCGACGTGCGCTTCCTGCCCAACCCGCACTGGGTGCCCGAGCTGCGCCCCAAGGTCGGCCAGCACCCGGCGGTGCGCGACTACGTCCTGGCCCAGCCCGAGACCAAGCTGTTCCTTGACCGCCTGCAGGAGCTCCTCGAGGTCGCCCTGCCCGGCTACGTCCGCGAGGGCAAGCAGTACCTGACCATCGCCATCGGCTGCACCGGGGGCCGCCACCGCAGCGTCGTCCTCACCGAGGAGCTGGGCGACTGGCTCGCGCAGCAGGGTTTCAAGGTCCACCTTGCCCACCGGGACATGGAGCGGGAGTGA
PROTEIN sequence
Length: 178
HPVAGERVVESIARERSLLRDLRATADLVVDTSDLNVHELRAKMLAAFAGEETGMLVTVSSFGFKYGLPLDADMVVDVRFLPNPHWVPELRPKVGQHPAVRDYVLAQPETKLFLDRLQELLEVALPGYVREGKQYLTIAIGCTGGRHRSVVLTEELGDWLAQQGFKVHLAHRDMERE*