ggKbase home page

PLM3_60_coex_sep16_scaffold_6159_14

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_7

near complete RP 46 / 55 BSCG 45 / 51 MC: 2 ASCG 11 / 38 MC: 3
Location: 13538..14086

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimM Tax=Micromonospora sp. ATCC 39149 RepID=C4RC83_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 47.0
  • Coverage: 183.0
  • Bit_score: 145
  • Evalue 4.40e-32
rimM; 16S rRNA-processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 48.4
  • Coverage: 184.0
  • Bit_score: 145
  • Evalue 1.30e-32
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.0
  • Coverage: 183.0
  • Bit_score: 145
  • Evalue 6.20e-32

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Micromonospora sp. ATCC 39149 → Micromonospora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 549
ATGACCGAGGTCCCGGCCCGGCTCGTGGTCGGCCGGGTGCTCCGGCCCCACGGCCTGCACGGGGAGGTCGCCGTCGAGGTCCTCTCCGACGCGCCCGGACGGTTCGCGCCAGGTGCCGAGCTGGGCCTCGGTGACCTCGACGCCGGGGGCGCCGCCGCGACCGGGACCGGCCTCCGCCCCCTGGTCGTCGCCGCCGCCCGCTGGCACCACGGCCGCCTGCTGCTCACCGTCGACGGGGTCGGCGACCGCGACGCCGCCGAGACCCTGCGCGGCGGCCTGCTCTCCATCCCCGTCGAGGCGGCCCGCCCCCTCGAGCCAGGCGAGTACTGGCCCCACCAGCTCATCGGCCTGCCCGTGCTCGACCGCGACGGCCAGCCGCGAGGCACCATCGCCGAGGTCCTGCCTGGCACCGCCCACGACCTGCTCTCGGTCCGCCTGCCCGACGACCGGACCGCGCTCGTGCCCGCCGTGGCCGCCCTGGTGCGCGTCGACCTCGACGCCGGCCGGGTCGTGGTCGACACCCTTCCCGGCCTGCTCGACCCCTCCTGA
PROTEIN sequence
Length: 183
MTEVPARLVVGRVLRPHGLHGEVAVEVLSDAPGRFAPGAELGLGDLDAGGAAATGTGLRPLVVAAARWHHGRLLLTVDGVGDRDAAETLRGGLLSIPVEAARPLEPGEYWPHQLIGLPVLDRDGQPRGTIAEVLPGTAHDLLSVRLPDDRTALVPAVAALVRVDLDAGRVVVDTLPGLLDPS*