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PLM3_60_coex_sep16_scaffold_6225_8

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_7

near complete RP 46 / 55 BSCG 45 / 51 MC: 2 ASCG 11 / 38 MC: 3
Location: comp(5896..6330)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family Tax=Pseudomonas stutzeri RCH2 RepID=L0GRE1_PSEST similarity UNIREF
DB: UNIREF100
  • Identity: 39.7
  • Coverage: 126.0
  • Bit_score: 87
  • Evalue 8.70e-15
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 39.7
  • Coverage: 126.0
  • Bit_score: 87
  • Evalue 2.50e-15
Tax=RBG_16_Actinobacteria_70_17_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 49.6
  • Coverage: 123.0
  • Bit_score: 97
  • Evalue 1.50e-17

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Taxonomy

RBG_16_Actinobacteria_70_17_curated → Acidimicrobiia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 435
GTGGTGCGCAAGCTGAGCAGCTTTCGCCATGAGGCGTCCTTCACGACGTGGCTGAACCGGGTGACGACGAACGTGGCCATGAGCGCGCTGAAGCGCAGGACACGGCGGGTCGCCGTCGAGGGGGCGATCATCCCGCCCGACACGCGCGATCCCTCCCCGGACCCGGCCGAGCGGGCAGAGACGGTGGCCCTCGCCCAGCGGCTCGAGCGCCTGATCGCCGAGCTGCCCCAGGGGCAGCGGCAGGTGCTCGTGCTGCGAGACCTGTACGGGCAGTCAACCGACGAGGTGGCGGATGCGATGGGACTGACCCCCGGAGCGGTGAAGGTGCGCCTGTTCCGGGCTCGCGAGCGGCTCAAGGCCGAGCTCGAGTCGGCCGAGGGCGGCCAGGTGGTGGTCCTCAACGGGCGCCGCAGGGCATCGGGACGGCGATCATGA
PROTEIN sequence
Length: 145
VVRKLSSFRHEASFTTWLNRVTTNVAMSALKRRTRRVAVEGAIIPPDTRDPSPDPAERAETVALAQRLERLIAELPQGQRQVLVLRDLYGQSTDEVADAMGLTPGAVKVRLFRARERLKAELESAEGGQVVVLNGRRRASGRRS*