ggKbase home page

PLM3_60_coex_sep16_scaffold_9069_5

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_7

near complete RP 46 / 55 BSCG 45 / 51 MC: 2 ASCG 11 / 38 MC: 3
Location: comp(6062..7408)

Top 3 Functional Annotations

Value Algorithm Source
Zinc finger SWIM domain protein Tax=Pedosphaera parvula Ellin514 RepID=B9XDN9_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 48.3
  • Coverage: 441.0
  • Bit_score: 438
  • Evalue 8.20e-120
Zinc finger SWIM domain protein {ECO:0000313|EMBL:EEF62185.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.3
  • Coverage: 441.0
  • Bit_score: 438
  • Evalue 1.10e-119
zinc finger SWIM domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 48.5
  • Coverage: 441.0
  • Bit_score: 416
  • Evalue 9.40e-114

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1347
ATGGAGGCTGACGGGGAGGCATTGGTGGCGACGCTCACGGCCGAGCAGGTGCTCGCGCTGGCGCCCGACGCCGCGGCCGCCTCGGCCGGCCGGGGCGTGGCCAGCGCCGGCCGCTGGGCCTCGCTCGGCCGCTCCGGCCGGGCGGTGTGGGGCGAGTACCGGGGGAGCGGCCGCCACCCCTACCAGACCCAGGCCGACCTGGGCGGGCCCGCGTACCGCTGCACCTGCCCGAGCCGCAAGCTCCCCTGCAAGCATGCCCTCGGCCTGCTGCTCCTGCTCGCCGGCGAGCACGTCGTGGTGCCCGAGGCCGGCCCGCCCGGCTGGGTCGCAGAGTGGCTCGCGGGACGGGCCGAACGAGCCGCACGCCGTGCCCTCCGGCCGGAGCGGGCGGCCACGACCCCCGATCCCGCCGCCCGGGCCAGGCGAGCGGCCGGCCGCGCCGCCAAGGTCGAGGGGGGCGTGGCCGAGCTCGGGCTGCTGCTGCGCGACGTGGTCCGCGGCGGGCTGGCCGCGCCACGGCCCGCCCGCTTCTGGGACGACGCCGCCGCCCGCATGGTCGACGCCCAGGCGCCCGGTCTGGCCGGGCGCCTGCGCCGGGTCGCCGCCCTGCCCGAGGTGGGGGAGCGCTGGCCCGAGCGGCTGCTCGAGGAGCTGGCCCGCCTCCACCTCCTGGTCGAGGCCTGCCGCCGCCTCGACGAGCTGCCGCCGGCGACCCGGGCCGACGTCCGCGCCATGGTCGGCTGGCCTCAGCCCAAGGAGGAGCTGCTCGCCCAGCCCGGCCTGCGGGACCACTGGGGCGTGGTGGCGCAGCGGGTGGCCGACGAAGACCGCCTGCGAGTGCAGCGCACCTGGCTCTGGGGTGGGCGCAGCGGCCGCCCCGCCGTCCTGCTGGAGTTCGCGCCGCTCGGCCAGCCCCTGCCCGCCGGGCCGCCACCCGGCTCCGGGCTCGACGCCGAGCTGGTCTTCTACCCGGGCAGCACGCCCCTGCGGGCGCTGGTCAAGGCCGAGCACGCCAGTCGCGTCGAGTTCCCGCCCGTGCGGCCCGGGCTCGCCACCGTCGAGGACGCCCACGCCGCCTACGCTGCCGCCCTGGCCGCCAACCCCTGGGTCGGGCCCCTCCCGGTGGTGCTCGACGCGGTGGTGCCGGTCCCGCGGCGGCAGTGGGTGCTGCGGGACCCGTCGGGCGCCTGCCTGCCCCTCGCCCCCTGGTTCGGCGCCGGCTGGCAGCTCGCCGCGCTCGCCGGTGGCCGGCCGGTGCGGGTCTTCGGGGAGTGGGACGGCGAGCACCTGCTGCCGCTGGCCGTGCTCGCCGGCGGCCGGCTCGTCACCGCCGACCGGTGGGCGTGA
PROTEIN sequence
Length: 449
MEADGEALVATLTAEQVLALAPDAAAASAGRGVASAGRWASLGRSGRAVWGEYRGSGRHPYQTQADLGGPAYRCTCPSRKLPCKHALGLLLLLAGEHVVVPEAGPPGWVAEWLAGRAERAARRALRPERAATTPDPAARARRAAGRAAKVEGGVAELGLLLRDVVRGGLAAPRPARFWDDAAARMVDAQAPGLAGRLRRVAALPEVGERWPERLLEELARLHLLVEACRRLDELPPATRADVRAMVGWPQPKEELLAQPGLRDHWGVVAQRVADEDRLRVQRTWLWGGRSGRPAVLLEFAPLGQPLPAGPPPGSGLDAELVFYPGSTPLRALVKAEHASRVEFPPVRPGLATVEDAHAAYAAALAANPWVGPLPVVLDAVVPVPRRQWVLRDPSGACLPLAPWFGAGWQLAALAGGRPVRVFGEWDGEHLLPLAVLAGGRLVTADRWA*