ggKbase home page

PLM3_60_coex_sep16_scaffold_14167_1

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_7

near complete RP 46 / 55 BSCG 45 / 51 MC: 2 ASCG 11 / 38 MC: 3
Location: comp(118..816)

Top 3 Functional Annotations

Value Algorithm Source
sdhB; succinate dehydrogenase iron-sulfur subunit (EC:1.3.5.1) similarity KEGG
DB: KEGG
  • Identity: 68.5
  • Coverage: 232.0
  • Bit_score: 362
  • Evalue 8.30e-98
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain CcI3).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.5
  • Coverage: 232.0
  • Bit_score: 362
  • Evalue 4.10e-97
Succinate dehydrogenase subunit B Tax=Frankia sp. (strain CcI3) RepID=Q2JF80_FRASC similarity UNIREF
DB: UNIREF100
  • Identity: 68.5
  • Coverage: 232.0
  • Bit_score: 362
  • Evalue 2.90e-97

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Frankia sp. CcI3 → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 699
ATGCAGGTGACGCTGCGGGTCCGCCGCTTCAACCCGGAGACGGACGAGGCCCCCCACTTCGAGACCTACGAGATCCCGGCCGAACCGATGGACCGGGTCCTCGACCTGCTGCACTACGTCAAGTGGAACATCGATGGCTCGTTGACCTTCCGGCGGTCGTGCGCCCACGGCATCTGCGGGTCGGACGCCATGCTCATCAACGGCGCCAACCACCTGGCCTGCAAGGTGCTGGTGCGCGAGGTGGGCGACCAGATCACGGTGGAGGCGCTGCGCGGCCTGCCGCTGGCCAAGGACCTGGTCGTGGACATGGAGCCGTTCTTCCGCAGCTACCGGGAGGCGATGCCGTACCTCGTCAACGACGAGCCGGCGCCCGACAGCGAGCGCCTGCAGTCGCAGCAGGAGCGGGAGCGCTTCGACGACACCACCAAGTGCATCCTGTGCGCCGCCTGCACCACCTCCTGCCCGGTGTTCTGGGCCGACGAGGAGTACTTCGGCCCGGCCGCGATCGTCAACGCCCACCGCTTCATCTTCGACTCCCGCGACCAAGGCGCCGCCCAGCGGCTCGAGGTGCTGAACGACAAGGAGGGGGTCTGGCGCTGCCGGACCACCTTCAACTGCACCGATGCCTGCCCGCGTGGGATCAAGGTCACCCAGGCGATCCAGGAGGTCAAGCGGGCCCTGCTGTTCCGGCGCGTGTAG
PROTEIN sequence
Length: 233
MQVTLRVRRFNPETDEAPHFETYEIPAEPMDRVLDLLHYVKWNIDGSLTFRRSCAHGICGSDAMLINGANHLACKVLVREVGDQITVEALRGLPLAKDLVVDMEPFFRSYREAMPYLVNDEPAPDSERLQSQQERERFDDTTKCILCAACTTSCPVFWADEEYFGPAAIVNAHRFIFDSRDQGAAQRLEVLNDKEGVWRCRTTFNCTDACPRGIKVTQAIQEVKRALLFRRV*