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PLM3_60_coex_sep16_scaffold_18365_6

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_7

near complete RP 46 / 55 BSCG 45 / 51 MC: 2 ASCG 11 / 38 MC: 3
Location: comp(4212..5066)

Top 3 Functional Annotations

Value Algorithm Source
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter soli.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.8
  • Coverage: 289.0
  • Bit_score: 270
  • Evalue 2.00e-69
hypothetical protein Tax=Desulfurispora thermophila RepID=UPI00037160B9 similarity UNIREF
DB: UNIREF100
  • Identity: 50.9
  • Coverage: 285.0
  • Bit_score: 282
  • Evalue 4.70e-73
dapF; diaminopimelate epimerase similarity KEGG
DB: KEGG
  • Identity: 50.5
  • Coverage: 275.0
  • Bit_score: 268
  • Evalue 2.00e-69

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Taxonomy

Geobacter soli → Geobacter → Desulfuromonadales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 855
GTGGAGTTCGTCAAGGCGCACGGCACGGGCAACGACTTCGTGGTGGTCGAGGACCTCGGCGACCGCTACGAGCTGTCGGCCGAGTTCGTGCGGGCGGTCTGCGACCGCCACTTCGGCGTCGGCGGCGACGGCGTGATCCGGATCGCCCCAGGCACCAAGGCCCCGTTCTTCATGGACTACCGCAACGCCGACGGGTCGGTGGCGGAGATGTGTGGCAACGGCGTTCGGGTCGTCGGCAAGTACCTCGCCGACCGCGGCCACGTGGCCCGCGCGTTCGACCTCGAGACGCGGGCGGGGGTCAAGCACCTCGAGCTGCATGCGGCCGACGACGGCAGCGTCGACCGGGTCACGGTCGACATGGGCGCGCCCGGCTTCGACCGGGCCGACCTGCCCATGCTCGGGGAGGGCGAGGCGCTGAAGGAGCCATTCGACGTCGGCGGCCAGACCGTCGTCGGGACCTGCCTGTCCATGGGCAACCCGCACGTGGTCGTGGTGGTCGACGACGTGGACGCGTTCCCCGTGACGACCCTCGGGCCGCTGCTCGAGACCCACCCCGCCTTCCCCAACCGGACCAACGTGGAGTTCGTGCAGGTCGTCGGCGAGGACCGGCTGCGCCAGCGGACCTGGGAGCGCGGCGTGGGGGAGACCCTGGCCTGCGGGACGGGCGCGTGCGCGGTGGCGGTGGCGGGCCAGGTGCGCGGCCTCACCGGGCAGCGGGTCGTGATCGAGCTGCGCGGCGGCGTCCTGGAGCTCGAGTGGGCGCCCGGCCGCACGGTCCGGATGACCGGGCCGGCCCGGGAGGTCGCCCACGGCACCCTTGGCGACGAGCTGCTCGGGGCCCTGGGACGGACCTGA
PROTEIN sequence
Length: 285
VEFVKAHGTGNDFVVVEDLGDRYELSAEFVRAVCDRHFGVGGDGVIRIAPGTKAPFFMDYRNADGSVAEMCGNGVRVVGKYLADRGHVARAFDLETRAGVKHLELHAADDGSVDRVTVDMGAPGFDRADLPMLGEGEALKEPFDVGGQTVVGTCLSMGNPHVVVVVDDVDAFPVTTLGPLLETHPAFPNRTNVEFVQVVGEDRLRQRTWERGVGETLACGTGACAVAVAGQVRGLTGQRVVIELRGGVLELEWAPGRTVRMTGPAREVAHGTLGDELLGALGRT*