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PLM3_60_coex_sep16_scaffold_19183_2

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_7

near complete RP 46 / 55 BSCG 45 / 51 MC: 2 ASCG 11 / 38 MC: 3
Location: comp(196..1839)

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide biosynthesis protein Tax=Frankia sp. (strain EuI1c) RepID=E3J298_FRASU similarity UNIREF
DB: UNIREF100
  • Identity: 44.6
  • Coverage: 556.0
  • Bit_score: 420
  • Evalue 1.60e-114
lipopolysaccharide biosynthesis protein similarity KEGG
DB: KEGG
  • Identity: 44.6
  • Coverage: 556.0
  • Bit_score: 420
  • Evalue 4.70e-115
Lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:ADP78136.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.6
  • Coverage: 556.0
  • Bit_score: 420
  • Evalue 2.30e-114

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Taxonomy

Frankia sp. EuI1c → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1644
GTGGAGAACGTCGACCAGGTGAACTCCGGCCCCGGCCTGCTCGCCGCCCTGTGGCGCTACCGCGTGCTCGTGGCGGTGGTCACCGTCCTTGCCGGGCTCACCGGCTACGGGCTGTCGCGGTTGCAGCCGACCCTCTACGAAGGCAGCGCCAAGCTGCTGCTCGCCGACCCGCGCGGCAAGAGCGTCTTCCAGCCCGACCAGGCCCAGCCGGTGGTCCTGGACCCCTCGCGCGCCATCCGCAACCGCGCCGAGGTCATCACCTCCCGCTCGGTGATCTCGCGGGCGGCCACCCAACTCGGCCGCGCGCACGAGCTCGACAAGCTGCTGCAGCGCGTCTCGGCTGAGCCCTCGGCCGAGCTGGACCTGATCACCGTCCACGCGCTCGACCCGACGCCCAAGGGCGCCGCCGCGCTCGCCAACGCCGTCGCCCGCGCCTACCAGGCCGTGGCCTCGCAGCAGGTCACCGCGACCGCCCAGAAGACGCTGCGGCAGCTCGACCGCTCCAACCGCCAGCTCCGGGCCAGGATCGCGCTGCTCGGCAGGCGCATCGCCGCCAACCCGGAGAACGCCATCCTGCTCGCCGAGCGGAGCGCGGCGGTGGAGCAGCTCACGACCAGCCAGAACCGGGCCGACCAGATCGCGGTCGAGGCGGGCCTGCTCGGCTCGGGGGTCGACTTCTTCGAGCCGGCCAAGCTGCCGGTCAGCCCGGCCCAGCCCCACTCGTTCGCCGCCGGCTTGCTCGGCGTGCTGCTGGGGTTCCTCGGCGTGGGCGCGCTGGCCTGGTGGCAGGCCGAGCACACCCAGGTCGCCGAAGGCAGGCAGGACGCCGCCACCGTCCTCAAGGCGTCACTGCTCGGCGAGGTCCCGGAGTTCTCCACCGTCGGCGTGACCGGGTTCATCCCGGCCCAGACCGCGCCCAAGTCGGTCGCGGGCGAGGCCTACCAGTTCCTGGTCGCCTCCCTGGAGTTCTCGCTCTCCCAGTCCAGGGGCCGGACGGTGCTGATCACCAGCGCCGGGCCGACCGACGGCAAGACCGTGACCGCCCTCAACCTCGCGATCGCGGCGATGCGCGACGGCCGCCGGGTCCTGCTGGTCGACGCCGACGAGCGGGCCCGCGGCCTGACCAAGCTGACCGGCGTCCCGCCCTCCCCCGGCCTCACCGACCTGGCCAACGGCGAGCTGCCGCTGGGGGCATGCGTCAGCGACTACCGCCTCGCCGAGGACCAGCGGCTCCCCATGGTCCCTGCCGGCTCCGCGCTGACCGAGCCGGCAGGCTTCTTCCGCTCCCCTGGCTTCCGCAAGGCGCTGGTCGCGGTGAAGGAACAGGCCGACCTCGTCGTGGTCGACTCGCCGCCGCTGCTCGCGGTGGCCGACACCAGCGCGATCGCGTCCCAGGCGGACGGGATCGTGGTGGTGGTCTCGCGCGGCACCCGCCTGCGTGTCCTCGAGGAGGTCAGGGAGCGGCTCGAGTTCGTCGGCACCCCGGTGCTCGGCTACGTCTTCAACCGCGCCGACCTGCGCCGCGGGCGGTCGTACGGCCGCTACGGCCGCTACGGCTACGGCGGGTACGGCGAGCAGCGCCTCTCCGCCAACGCCAGCCGCGCCGGCGACGGCAGCCAGGCCAGGAGCCAGGCACGCCAGTGA
PROTEIN sequence
Length: 548
VENVDQVNSGPGLLAALWRYRVLVAVVTVLAGLTGYGLSRLQPTLYEGSAKLLLADPRGKSVFQPDQAQPVVLDPSRAIRNRAEVITSRSVISRAATQLGRAHELDKLLQRVSAEPSAELDLITVHALDPTPKGAAALANAVARAYQAVASQQVTATAQKTLRQLDRSNRQLRARIALLGRRIAANPENAILLAERSAAVEQLTTSQNRADQIAVEAGLLGSGVDFFEPAKLPVSPAQPHSFAAGLLGVLLGFLGVGALAWWQAEHTQVAEGRQDAATVLKASLLGEVPEFSTVGVTGFIPAQTAPKSVAGEAYQFLVASLEFSLSQSRGRTVLITSAGPTDGKTVTALNLAIAAMRDGRRVLLVDADERARGLTKLTGVPPSPGLTDLANGELPLGACVSDYRLAEDQRLPMVPAGSALTEPAGFFRSPGFRKALVAVKEQADLVVVDSPPLLAVADTSAIASQADGIVVVVSRGTRLRVLEEVRERLEFVGTPVLGYVFNRADLRRGRSYGRYGRYGYGGYGEQRLSANASRAGDGSQARSQARQ*