ggKbase home page

PLM3_60_coex_sep16_scaffold_27567_3

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_7

near complete RP 46 / 55 BSCG 45 / 51 MC: 2 ASCG 11 / 38 MC: 3
Location: 1219..2433

Top 3 Functional Annotations

Value Algorithm Source
GntR family transcriptional regulator Tax=Salinispora arenicola RepID=UPI00036E81DD similarity UNIREF
DB: UNIREF100
  • Identity: 40.5
  • Coverage: 395.0
  • Bit_score: 248
  • Evalue 1.10e-62
Putative prophage phiRv2 integrase {ECO:0000313|EMBL:KJF15997.1}; species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidithrix.;" source="Acidithrix ferrooxidans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.4
  • Coverage: 378.0
  • Bit_score: 252
  • Evalue 6.20e-64
integrase family protein similarity KEGG
DB: KEGG
  • Identity: 37.2
  • Coverage: 390.0
  • Bit_score: 233
  • Evalue 7.80e-59

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Acidithrix ferrooxidans → Acidithrix → Acidimicrobiales → Acidimicrobiia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1215
GTGCTTGCCTTCAGGCACGGTATCTGGCACGGTTCTCGCCTGATCCGGCTGTCCAGCGAGGCAAGCAAGGTGATCCGGAACCGCGGCGACTACTGGCAGGTCAAGGTCTACGCCGGCCGTGACCCGCTGACTGGCAAGGAACGCTACGAGTACGACCGCGCCAGGACCAAGCGCGAGGCCGACCGCGTCGAGGCGGCGCTGAAGACCAAGGTGGCCGAGGGCCGCCACCGCAGCACCGCCGCGCGGACGGTCGCCGACCTGGTGGAGCGCTGGTACGAGTGGCGCCAGGGCGTGAGGGAGATCTCCCCCACCACCCTGGAGGGCTACCGCCGCCAGATCGACCAGCGCATCATCCCCGCGCTCGGACGCATCCCCGTCCGGCGCCTGGACGTGGAGACGCTGGACACCTTCTACGCGGAGCTCCGCCGGCGCGGCAAGGACGGCGGCCGGCCGCTGTCGGCCAGCACCGTCCGGGCCGTCCACACCGTCTTGTCCGGGTCCTTGCGGCAGGCGGTGGCGTGGGGTTGGATTCCGCACAATCCCGCCCGGCTCGCCACACCCCCGTCGGTGCAGCGCAGCGACGTGGCGCCGCCACCTGTCGACCAGGTGGCCGGCCTGCTGGCGACGGCCCAGGAGCGCAACCTCAAGCTCGGGCTGTTCCTGCGGCTGGCGGTGGTGCTCGGCGCCCGCCGCGGGGAGCTGTGCGCGCTGCGCTGGCAGCACATCGACCTGGAGCGCGGGGAGGTGCTGCTGGAGCGCGGCGTGGTCTACGTGACCGGCCAGCCGCTGATCGACAAGGCCACCAAGACCCGCAGCAAGCGGCGGCTGGCTCTGGACGCCGGGACGGTCGAGCTGCTCCGCGCCCATAGGGAGCGCGCCGAGCAGGTCGCCAGTGAGCTGGGCTTCACCCTCCCGGCCAGCGCCTACCTCTTCAGCCGCGAGCCGGACGGGTCGCGGCCCATCCACCCGTCGCTGGTGACGCATCAGTTCGCCGACCTGGCCCGGTCGCTCGGGGTGCGCTGCCGCCTGCACGACCTTCGGCACCTGATGGTCACCTACCTGATCTCGCAGGGCGTGGACTGGCGCACGGCCGCCGGCCGGGCCGGGCACGCCGGCCCGCACATGACGCTCGGGACCTACGCGCACTTCCAGCCCGCCCAGGATCGCGCCGCCGCCGAGCTGCTCGCCACACTCTGCGACGGCAGCGCGCAGTAG
PROTEIN sequence
Length: 405
VLAFRHGIWHGSRLIRLSSEASKVIRNRGDYWQVKVYAGRDPLTGKERYEYDRARTKREADRVEAALKTKVAEGRHRSTAARTVADLVERWYEWRQGVREISPTTLEGYRRQIDQRIIPALGRIPVRRLDVETLDTFYAELRRRGKDGGRPLSASTVRAVHTVLSGSLRQAVAWGWIPHNPARLATPPSVQRSDVAPPPVDQVAGLLATAQERNLKLGLFLRLAVVLGARRGELCALRWQHIDLERGEVLLERGVVYVTGQPLIDKATKTRSKRRLALDAGTVELLRAHRERAEQVASELGFTLPASAYLFSREPDGSRPIHPSLVTHQFADLARSLGVRCRLHDLRHLMVTYLISQGVDWRTAAGRAGHAGPHMTLGTYAHFQPAQDRAAAELLATLCDGSAQ*