ggKbase home page

PLM3_60_coex_sep16_scaffold_3449_3

Organism: PLM3_60_coex_sep16_Alphaproteobacteria_Rhizobiales_61_7

near complete RP 44 / 55 MC: 5 BSCG 42 / 51 MC: 1 ASCG 7 / 38 MC: 1
Location: comp(3192..6479)

Top 3 Functional Annotations

Value Algorithm Source
Transglutaminase-like Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q133D1_RHOPS similarity UNIREF
DB: UNIREF100
  • Identity: 83.6
  • Coverage: 1107.0
  • Bit_score: 1961
  • Evalue 0.0
Transglutaminase-like {ECO:0000313|EMBL:ABE40808.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.6
  • Coverage: 1107.0
  • Bit_score: 1961
  • Evalue 0.0
transglutaminase-like protein similarity KEGG
DB: KEGG
  • Identity: 83.6
  • Coverage: 1107.0
  • Bit_score: 1961
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3288
GTGTCGATCTTCGTCGCACTACATCACGTCACGCACTACAAATATGACCGTCCGATCGACCTCGGCCCGCAAACCATCCGGCTGCGGCCGGCGCCGCACACCCGCACCCCGATTCTGAGCTATTCGCTCAAGGTTACGCCGGCAAACCATTTCGTGAACTGGCAGCAGGATCCGCAAGGCAACTGGCTGGCGCGGTTTGTCTTCCCCGAAAAGGCCACCGAGCTGAAGATCGAAGTCGATTTCACGGCGCAGATGACCGTGATCAATCCGTTCGATTTCTTTGTCGAGCCTTACGCCGATAGTTTTCCGTTCGCTTATACCGACGATCTCAAGACCGAACTCGCGCCTTATCTGGCGACCGTCGAGGCAGGGCCGCTGCTGTCGGCTTACCTCGCGGGCATCCCGCGCGAGGCGCTCAGCACGGTCAATTTTCTGGTCGATCTCAATGCCCAATTGCAAAAGAAAATTCGCTACATCATCCGGATGGAGCCGGGGATCCAGACGCCGGAGCAGACGCTGGAATCGGGCGCTGGATCGTGCCGCGACTCGGCGTGGCTGCTGATCCAGATCTTTCGGCACCTCGGGCTCGCCGCCCGCTTCGTCTCGGGCTATCTCATTCAGTTGCGCCCCGACATCGATCCGGTCGAAGGACCGCGCGAGGTCGAGAGCGATTTTACGGATTTGCACGCCTGGGCCGAGGTTTATCTTCCGGGCGCCGGCTGGATCGGTTTCGACGTCACCTCGGGCATGCTGACCGGCGAGGGGCACATTCCGGTCGCCGCCACGCCGCACTATCGCTCGGCGGCGCCGATCAGCGGCGCGGTCGGATTCGCGCAGGTCGAATTCGGCTTCGAGATGAGCGTCAAGCGGATCCGCGAGGCGCCGCGAATAACAAAACCGTTCTCCGATGAATCCTGGGCGCGTCTCGACAAGCTCGGCGAGCAGGTCGATGCCGATCTGAAGGCCGGCGACGTGCGCCTGACGATGGGCGGCGAGCCGACCTTCGTTTCCGTCGACGACCTGGAATCGCCGGAATGGAACATTTCCGCGGTCGGTCCGACCAAGCGCGGGCTGGCGGACGATCTCATTCGCAAGTTACGGGCACGGTTCGCGCCGGGCGGCCTGCTGCATTTCGGACAGGGCAAGTGGTATCCCGGCGAAAGCTTGCCGCGCTGGGCGTTCGGACTCTATTGGCGCAAGGATGGCGTGCCGATCTGGAAGAACTCCGATTTGATCGCGAAGATCGAAGGACCGCGCCAAGCCGGAATCGAAGACGCCGAGCGCTTCGCGGAAGGGGCTGCAAAAAAGCTCGGCGTCGATTCCGAATATATCATGCCGGCGTTCGAAGACCCTTCGCACTGGCTGCAGAAGGAAGCCGGCCTGCCGCCGAATGTCGATCCCAGCGATTCCAAACTGTCCGATCCGGAAGAACGCTCGCGCATGGCGCGGGTGTTCGATCAGGGACTCAACGTTCCCAAGGGATTCGTCCTGCCGATCCAGCGCTGGAACGCCGATGCAAGCAAATCTTCCTCGCGCTGGAAGAGCGAGCGCTGGAAGCTGCGGCGCGGCAATCTGTTTCTGACGCCGGGCGATTCGCCGCTGGGCCTGCGGCTGCCGATCGCGTCACTGCCGCATATTCCCGCGGAAGAATTTCCCTATATCGTCGAGCAGGATCCGCTCGAGCCGCGCGATGCATTGCCGGTTTACGACGCGACGACGCCGACTGAGGCCGCGCCGCATCAGCAGGTGCAGGAGCAGCAGCTCAAAGGCGGCGGCGTACGCACCGCGATGTCGATCGAGATCCGCGACGGCATTCTGTGCGCCTTCATGCCGCCGGTGGAGAAGCTGGAGGATTATCTCGAACTGGTCACGGCGGTGGAGGCGACCGCCGAAGAAATGCAGATGCAGGTCCATGTCGAGGGTTACCCGCCGCCATTCGATCCGCGCGTCGAGGTGATCAAGGTGACGCCCGATCCCGGCGTGATTGAGATCAACATCCAGCCGGCGTCGAGCTGGCGCGAATCCGTCGACATCACATTCGGCCTTTACGAAGATTCGGCCCAGGTCCGGCTCGGCGCCAACAGGTTCCTCGTCGACGGCCGCCACACCGGCACCGGCGGCGGCAATCACGTGGTGGTCGGCGGCAGCACGCCGGCGGATTCACCATTCCTGCGCCGTCCGGATTTGCTGAAGAGCCTGGTGCTGTATTGGCAGCGGCATCCGTCGCTGTCTTATTTGTTCTCGGGCATGTTCATCGGTCCCACCAGCCAGGCGCCGCGTATCGACGAGGCGCGGCACGACGGCCTTTATGAACTGGAGATCGCGCTGGCCCATGTGCCGCCGCCGGGCATCAAAGCCCCGCTGTGGCTGGTGGATCGGCTGTTCCGGCACATCCTGGTGGATATCACCGGCAACACCCACCGCGCCGAGCTCTGTATCGACAAGCTTTATTCCCCCGACAGCTCTACCGGACGCCTCGGGCTGGTTGAATTCCGCGCCCTGGAAATGCCGCCCGACCCGCGCATGTCGCTGGCGCAGCAACTGCTGATCCGGGCGCTGATCGCAAAGCTCTGGCGCGAGCCGCAGCAGGGCAAGTTCGTGCGCTGGGGCACCACGCTGCATGATCGTTTCATGCTGCCGCATTTCCTCTGGGAGGATTTTCTGGGCGTGCTCGCCGAGTTGAAGCAATCCGGCTACGATTTTTCGCCGGATTGGTACGCGGCGCAGCTCGAATTCCGCTTCCCCGCTTTCGGCCGCGTCCATCATGGCGGTGTCGCGCTCGAAGTGCGCCAGGCCCTCGAACCCTGGCATGTCCTCGGCGAAGAGCAATCGGCCGGGGGCACCGTGCGCTATGTCGATTCGTCGGTGGAGCGGTTGCAGGTCAAGGCCAACGGATTTGTCGAAGGCCGCCACGTCGTCACCTGCAACGGCAGGCGGATGCCGATGACGGAAACCGGCCGTTCGGGCGAAGCGGTCGCGGCCGTCCGCTTCAAGGCATGGCAGCCGGCATCGGGGCTGCATCCGACCATTCCGGTCCATGCGCCGCTGACGTTTGATTTGATTGATACCTGGAACGGCCGGTCGCTGGGCGGCTGCGTCTATCACGTCGCCCATCCGGGCGGCCGCAGCTACGACACCAAACCGGTCAATTCCTACGAAGCCGAGGCGCGGCGGCTGGCCCGGTTTCAGGATCACGGCCACACCCCCGGCAAGATCGATCCGCCGCGTGAGGAACGCACACTAGAATTTCCGTTGACCCTCGACTTGAGGACGCCGCTCCTGCATTGA
PROTEIN sequence
Length: 1096
VSIFVALHHVTHYKYDRPIDLGPQTIRLRPAPHTRTPILSYSLKVTPANHFVNWQQDPQGNWLARFVFPEKATELKIEVDFTAQMTVINPFDFFVEPYADSFPFAYTDDLKTELAPYLATVEAGPLLSAYLAGIPREALSTVNFLVDLNAQLQKKIRYIIRMEPGIQTPEQTLESGAGSCRDSAWLLIQIFRHLGLAARFVSGYLIQLRPDIDPVEGPREVESDFTDLHAWAEVYLPGAGWIGFDVTSGMLTGEGHIPVAATPHYRSAAPISGAVGFAQVEFGFEMSVKRIREAPRITKPFSDESWARLDKLGEQVDADLKAGDVRLTMGGEPTFVSVDDLESPEWNISAVGPTKRGLADDLIRKLRARFAPGGLLHFGQGKWYPGESLPRWAFGLYWRKDGVPIWKNSDLIAKIEGPRQAGIEDAERFAEGAAKKLGVDSEYIMPAFEDPSHWLQKEAGLPPNVDPSDSKLSDPEERSRMARVFDQGLNVPKGFVLPIQRWNADASKSSSRWKSERWKLRRGNLFLTPGDSPLGLRLPIASLPHIPAEEFPYIVEQDPLEPRDALPVYDATTPTEAAPHQQVQEQQLKGGGVRTAMSIEIRDGILCAFMPPVEKLEDYLELVTAVEATAEEMQMQVHVEGYPPPFDPRVEVIKVTPDPGVIEINIQPASSWRESVDITFGLYEDSAQVRLGANRFLVDGRHTGTGGGNHVVVGGSTPADSPFLRRPDLLKSLVLYWQRHPSLSYLFSGMFIGPTSQAPRIDEARHDGLYELEIALAHVPPPGIKAPLWLVDRLFRHILVDITGNTHRAELCIDKLYSPDSSTGRLGLVEFRALEMPPDPRMSLAQQLLIRALIAKLWREPQQGKFVRWGTTLHDRFMLPHFLWEDFLGVLAELKQSGYDFSPDWYAAQLEFRFPAFGRVHHGGVALEVRQALEPWHVLGEEQSAGGTVRYVDSSVERLQVKANGFVEGRHVVTCNGRRMPMTETGRSGEAVAAVRFKAWQPASGLHPTIPVHAPLTFDLIDTWNGRSLGGCVYHVAHPGGRSYDTKPVNSYEAEARRLARFQDHGHTPGKIDPPREERTLEFPLTLDLRTPLLH*