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PLM3_60_coex_sep16_scaffold_6239_6

Organism: PLM3_60_coex_sep16_Alphaproteobacteria_Rhizobiales_61_7

near complete RP 44 / 55 MC: 5 BSCG 42 / 51 MC: 1 ASCG 7 / 38 MC: 1
Location: 5997..6353

Top 3 Functional Annotations

Value Algorithm Source
truB; tRNA pseudouridine synthase B (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 59.8
  • Coverage: 122.0
  • Bit_score: 124
  • Evalue 1.20e-26
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043051}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043054};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.8
  • Coverage: 122.0
  • Bit_score: 124
  • Evalue 5.70e-26
tRNA pseudouridine synthase B Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21C29_RHOPB similarity UNIREF
DB: UNIREF100
  • Identity: 59.8
  • Coverage: 122.0
  • Bit_score: 124
  • Evalue 4.10e-26

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 357
ATGATCGTGACCACCGCAAACAGCACCATCGAGCCGCCGATCGGTGATTCGGACGGCGCTGAAGAAAATAAATTTTCCAATGCGAATGGCGACGCCAGCGTAGGGCATGCCTCCCTCCCCAACACAGGCGGGAGGGAGCAGCCGGAAGCGGGGCATCGCGAGGCGCGGACAAATAACGACCCCCGCGGCAACAAGCAGCAGCGGCACCAGGGCCAGCCGCGGCGCGACAAGCGCGACGTCCACGGCTGGGTGGTGCTCGACAAGCCGATCGGCATGACGTCGACCCATGCGGTCGCGGTGGTGAAGCGGCTGTTCCAGGCCAAGCGCGCCGGCCATGCCGGCACGCTCGATCCGCTC
PROTEIN sequence
Length: 119
MIVTTANSTIEPPIGDSDGAEENKFSNANGDASVGHASLPNTGGREQPEAGHREARTNNDPRGNKQQRHQGQPRRDKRDVHGWVVLDKPIGMTSTHAVAVVKRLFQAKRAGHAGTLDPL