ggKbase home page

PLM3_60_coex_sep16_scaffold_6554_5

Organism: PLM3_60_coex_sep16_Alphaproteobacteria_Rhizobiales_61_7

near complete RP 44 / 55 MC: 5 BSCG 42 / 51 MC: 1 ASCG 7 / 38 MC: 1
Location: comp(3939..4637)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein Tax=Afipia birgiae RepID=UPI00030D3703 similarity UNIREF
DB: UNIREF100
  • Identity: 77.9
  • Coverage: 231.0
  • Bit_score: 337
  • Evalue 6.00e-90
Uncharacterized protein {ECO:0000313|EMBL:EKS39447.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.5
  • Coverage: 230.0
  • Bit_score: 332
  • Evalue 2.70e-88
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 58.3
  • Coverage: 230.0
  • Bit_score: 241
  • Evalue 1.60e-61

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 699
TTGAATCTGCCCGCCGCGCTCAACCTGGTGGAGCCGCTCGACCGTCAGACGCTGGGCGAGCGCGCCTACGCGAAACTGGCCGATCTCCTGATTTCCGGCCGGTTGGCGCCGGGCGAAAAACTGTCGCTGCGGGCAGCAGCTGATGTCCTCGGCGTCTCCATCATGCCAGTGCGTGAGGCGGTGTCACGGCTGGTCGCCGACAAGGCGTTGGAGGTGACGCCGAACCGCTCGGTACGCGTACCCCTGATGTCGGCGGCGCAATTTCGCGATCTCACCAAAGTGCGCATCGCCATTGAAGGCCATGCCGCGGCGGAAGCAGCCCTTCATCGTAACGACAGCGATCTTGTGTCGATCGCGAGCGCGGAAGAAGCGATGAGGGCGGAGAGTTTATCACCGACGCCCGACCTGCCGCGTGCGGTCGAGTTCAACAAGACGTTTCACTTCGCGGTTTATGAAGCGGCACACTCGCCGATCCTGGCGGCAATTATCCGTGCGCTCTGGCTCAAGGCGGGGCCGGTGATCAATCTCGATCTGCGCGCCAATCCCGAGCGGCTGGCGAAGGGCCAGGCGATCAGGTGTCATGCCGATGTGCGCCGGGCCATCGCCGCCGGCGACGGCGCGGCGGCACTTGACGGAATAGCTGCTGACATCAGCAGCGCCGCGGATTTTATTCTTTCTCGCGGCGGTCTGGCGGGCTGA
PROTEIN sequence
Length: 233
LNLPAALNLVEPLDRQTLGERAYAKLADLLISGRLAPGEKLSLRAAADVLGVSIMPVREAVSRLVADKALEVTPNRSVRVPLMSAAQFRDLTKVRIAIEGHAAAEAALHRNDSDLVSIASAEEAMRAESLSPTPDLPRAVEFNKTFHFAVYEAAHSPILAAIIRALWLKAGPVINLDLRANPERLAKGQAIRCHADVRRAIAAGDGAAALDGIAADISSAADFILSRGGLAG*