ggKbase home page

PLM3_60_coex_sep16_scaffold_8902_3

Organism: PLM3_60_coex_sep16_Alphaproteobacteria_Rhizobiales_61_7

near complete RP 44 / 55 MC: 5 BSCG 42 / 51 MC: 1 ASCG 7 / 38 MC: 1
Location: comp(732..944)

Top 3 Functional Annotations

Value Algorithm Source
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase Tax=Bradyrhizobium elkanii RepID=UPI0003779819 similarity UNIREF
DB: UNIREF100
  • Identity: 81.4
  • Coverage: 70.0
  • Bit_score: 125
  • Evalue 1.40e-26
Bifunctional enzyme IspD/IspF {ECO:0000256|HAMAP-Rule:MF_01520, ECO:0000256|SAAS:SAAS00096235}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.3
  • Coverage: 70.0
  • Bit_score: 127
  • Evalue 6.80e-27
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase similarity KEGG
DB: KEGG
  • Identity: 78.4
  • Coverage: 74.0
  • Bit_score: 119
  • Evalue 2.80e-25

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bradyrhizobium sp. LTSPM299 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 213
GTGACGCTGATTTGCGAACGGCCGAAAATCGGGCCGCTGCGCGATACCATGCGTAAACGTATCGCTGATATCACCGGGCTGAACGTCTCCCGCATCGCTGTGAAAGCAACCACCAGCGAACGACTTGGTTTCACGGGCCGCGAAGAAGGCATGGCCGCTACGGCGAGCGCCACCATCCGCCTGCCCTGGGGCGATAAGGGCTGGAGCGACTGA
PROTEIN sequence
Length: 71
VTLICERPKIGPLRDTMRKRIADITGLNVSRIAVKATTSERLGFTGREEGMAATASATIRLPWGDKGWSD*