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PLM3_60_coex_sep16_scaffold_14484_1

Organism: PLM3_60_coex_sep16_Alphaproteobacteria_Rhizobiales_61_7

near complete RP 44 / 55 MC: 5 BSCG 42 / 51 MC: 1 ASCG 7 / 38 MC: 1
Location: 3..3044

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 96.1
  • Coverage: 1013.0
  • Bit_score: 1918
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.1
  • Coverage: 1013.0
  • Bit_score: 1918
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' Tax=Rhodopseudomonas palustris (strain BisB18) RepID=RPOC_RHOPB similarity UNIREF
DB: UNIREF100
  • Identity: 96.1
  • Coverage: 1013.0
  • Bit_score: 1918
  • Evalue 0.0

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3042
CTCGACGCCAAGGGTCTGTCCACCACGGTGAAACAGGCGAAGAAGCTTGTCGAAAAAGAGCGTCCCGAGGTCTGGGATATTCTCGACGAGGTGATCCGCGAACATCCCGTGCTGCTGAACCGCGCGCCGACACTGCATCGTCTGGGTATCCAGGCGTTCGAGCCGGTGCTGATCGAAGGCAAGGCGATCCAGCTGCATCCGCTGGTGTGCGCGGCATTCAATGCCGACTTCGACGGCGACCAGATGGCCGTGCACGTTCCGCTGTCGCTGGAAGCGCAGCTCGAAGCGCGCGTGCTGATGATGTCGACCAACAATATCCTGCATCCGGCGAACGGTCAGCCGATCATCGTGCCGTCGCAGGACATCGTGCTTGGCCTGTATTATCTGTCGATCTTGCGCGAAGGCCTGCCGGGCGAAGGCAAGCTCTATGGCGAAATGGCCGAGATCGAGCATGCCCTGCATTCCAAGGTCATCCATCTCCACACCAAGATCAAATATCGCTGGCAAGGTGTCGACGAGAACAACAAGCCGGTGACCCGCTGGTTCGAAACCACGGCTGGCCGCGCCATGCTCGGTCAGGTGCTGCCGAAATCGCCGAAGATGCCATTCGACGTCGTCAACAAACTGATGACCAAGAAGGAAATCTCCGGCGTCATCGACCAGGTCTATCGTCACTGCGGCCAGAAGGAGACGGTGATCTTCTGCGACCGCATCATGGCGCTCGGCTTCTACAATGCGTTCAAGGCCGGCATTTCGTTCGGCAAGGACGACATGGTGGTGCCGGCATCGAAGTGGAAGATCGTCGAGGAGACCCGCACGCTCGCCAAGGAATTCGAGCAGCAGTACAACGACGGCTTGATCACCCACGGCGAGAAATACAACAAGGTCGTGGATGCCTGGTCGAAGTGCACCAAGCGAATCTCCGAAGACATGATGACGGAAATCTCCGCCGTTAAGAAGAATCCCAAAGGCGGCGAGGCCCAGATCAACTCGATCTTCATGATGTCGAATTCCGGCGCGCGCGGTTCGCAGGACCAGATGCGTCAGCTCGCCGGCATGCGCGGCCTGATGGCGAAGCCGTCGGGCGAGATCATCGAGACGCCGATCATTTCCAACTTCAAGGAAGGTCTGTCGGTGCTCGAATACTTCAACTCGACCCACGGCGCCCGCAAGGGTCTCGCGGATACCGCGTTGAAGACGGCGAACTCCGGTTACCTGACGCGTCGTCTGGTCGACGTGGCGCAGGACTGCATCATCACGGCCGATGACTGCGGCACCAAGCTCGGCATCAAGATGCGCGCCATCATCGATTCCGGCACGGTCGTCGCCTCGCTGGCGTCGCGCATCCTCGGCCGTACCAACGGCGAGGATCTGCGCGATCCCGCGACCAACAGGATCGTGGTCAAGCGCGGCACGCTGATGGAGGAGACTCACGTCGACGCCATTCAGCAGGCCGGCATTCAGGAAGTGAAAATCCGCTCGGCGCTGACCTGCGAACTCGTCAACGGCATCTGCGGCAAGTGCTATGGCCGCGATCTCGCCCGCGGCACGCCGGTCAACCACGGCGAAGCGGTCGGCGTCATCGCCGCACAGTCGATCGGCGAGCCCGGCACCCAGCTCACGATGCGGACGTTCCACATCGGCGGCGCGGCGCAGATCAACGAGCAGTCGTTCATCGAGTCGAACTTCGACGGCAAGGTGACGATCAAGAACAAGGCGATCGCGAAAAATGGCGAAGGCCATTTGGTCGCGATGGTCCGCAACATGGTGGTCGCGGTGGCGGACGCCGACGGCACCGAGCGTGCGACCCATCGCATTCAATACGGCGCGCGGATGCGGGTCGACGAAGGCGATATGGTCAAGCGCGGCCAGCGCATCGCGGAATGGGATCCGTACTCACGGCCGGTTCTCACCGAGGTCGAGGGCACCATCGGGTTCGAGGATCTGGTCGAGGGACAGTCGATCTCCGAGACGCTCGACGAATCCACCGGTATCGCCAAGCGCGTCGTCATCGACTGGCGCACGTCGCGGGGCGGGGCGGATCTGCGTCCGGCCATCGTCATCAAGGGCAAGGATGGAAAGATCCTCAAGCTCGCGCGTGGCGGCGAGGCTCGCTACATGCTTTCGGTTGACGCGATCCTGTCGGTCGATGTCGGCGCGAAGGTCAAGACCGGCGACATCCTGGCGCGTATTTCCACGGAAAGCGCGAAGACCAGGGACATCACCGGCGGTCTGCCGCGGGTGGCTGAGTTGTTCGAGGCCCGCAAGCCGAAGGATGCCGCGATCATCGCGGAAATCGCCGGCACCATCCGGTTCGGCCGCGACTACAAGAACAAGCGCCGCATCTCGATCGAGCCGATGGACAAGAACGAGGAGACCCGCGAGTACCTCATTCCGAAGGGCAAGCACATCCATCTGCAGGACGGCGACATCGTCGAAAAGGGCGATTTCATCGTCGAAGGCAATCCGGCGCCGCACGACATCCTGGCGATCAAGGGCATCGAGGAACTCGCTGCCTATCTGGTCAACGAGATCCAGGAGGTCTACCGGCTGCAGGGCGTGCTGATCAACGACAAGCACATCGAAGTGATTGTCCGTCAGATGCTGCAGAAGGTGGAGATCACCGACCAGGGTGAGACCGACATGATCTCGGGCGAACAGATCGACAAGATCGAGTTCGACGTGATAAACGCCAAGGCCAAGGAAGAGGGCAAGAAGATCGCCACGGGAACGCCGGTGCTGCTCGGCATTACCAAGGCGAGCTTGCAGACCCGCTCGTTCTTCTCGGCAGCCTCGTTCCAGGAGACCACCCGCGTGCTCACCGAAGCCGCCGTCAACGGCAAGGTGGATCCGCTCGAAGGCCTCAAGGAGAACGTCATTGTCGGCCGGCTGATCCCGGCGGGCACCGGCGCCTCGATGGCCAAGATCCGCGAAGTCGCTGTGAAGCGCGACAAGCTGATTCTCGACGAACGCGAAAAGCAGGCCACGATCGTGCCTGCGGCACCGGAAGTCGAACCTCTGGCGCTGCCGCCGGCGGAATAA
PROTEIN sequence
Length: 1014
LDAKGLSTTVKQAKKLVEKERPEVWDILDEVIREHPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQLEARVLMMSTNNILHPANGQPIIVPSQDIVLGLYYLSILREGLPGEGKLYGEMAEIEHALHSKVIHLHTKIKYRWQGVDENNKPVTRWFETTAGRAMLGQVLPKSPKMPFDVVNKLMTKKEISGVIDQVYRHCGQKETVIFCDRIMALGFYNAFKAGISFGKDDMVVPASKWKIVEETRTLAKEFEQQYNDGLITHGEKYNKVVDAWSKCTKRISEDMMTEISAVKKNPKGGEAQINSIFMMSNSGARGSQDQMRQLAGMRGLMAKPSGEIIETPIISNFKEGLSVLEYFNSTHGARKGLADTALKTANSGYLTRRLVDVAQDCIITADDCGTKLGIKMRAIIDSGTVVASLASRILGRTNGEDLRDPATNRIVVKRGTLMEETHVDAIQQAGIQEVKIRSALTCELVNGICGKCYGRDLARGTPVNHGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQINEQSFIESNFDGKVTIKNKAIAKNGEGHLVAMVRNMVVAVADADGTERATHRIQYGARMRVDEGDMVKRGQRIAEWDPYSRPVLTEVEGTIGFEDLVEGQSISETLDESTGIAKRVVIDWRTSRGGADLRPAIVIKGKDGKILKLARGGEARYMLSVDAILSVDVGAKVKTGDILARISTESAKTRDITGGLPRVAELFEARKPKDAAIIAEIAGTIRFGRDYKNKRRISIEPMDKNEETREYLIPKGKHIHLQDGDIVEKGDFIVEGNPAPHDILAIKGIEELAAYLVNEIQEVYRLQGVLINDKHIEVIVRQMLQKVEITDQGETDMISGEQIDKIEFDVINAKAKEEGKKIATGTPVLLGITKASLQTRSFFSAASFQETTRVLTEAAVNGKVDPLEGLKENVIVGRLIPAGTGASMAKIREVAVKRDKLILDEREKQATIVPAAPEVEPLALPPAE*