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PLM3_60_coex_sep16_scaffold_14518_6

Organism: PLM3_60_coex_sep16_Alphaproteobacteria_Rhizobiales_61_7

near complete RP 44 / 55 MC: 5 BSCG 42 / 51 MC: 1 ASCG 7 / 38 MC: 1
Location: comp(3518..3889)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.4
  • Coverage: 123.0
  • Bit_score: 255
  • Evalue 2.20e-65
Pseudouridine synthase Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QN01_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 98.4
  • Coverage: 123.0
  • Bit_score: 255
  • Evalue 1.60e-65
pseudouridine synthase RluD similarity KEGG
DB: KEGG
  • Identity: 98.4
  • Coverage: 123.0
  • Bit_score: 255
  • Evalue 4.50e-66

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Taxonomy

Nitrobacter hamburgensis → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 372
GCGGCGCACGGCGACGAGGGCGCCAGCCATGCCGTGACTTATTATGCCGTGGTGGAGACGTCGGCGCAGAAGCTGGCCTGGGTGTCGTTGAAACCGGTCACCGGACGGACCCATCAGCTGCGCGCGCACATGGCGCATATCGATCACGCCATCGTCGGTGATCCCAAATATTTCAACAAGGAAAACTGGCAACTGCCGGGCGGCCTGCAAAAACGGCTGCATCTGCTGGCGCGCCGGATCGTGATCCCGCATCCGCGCGGCGGGTTTATCGACGCGACCGCGCCGCTGCCCCCGCATATGTTGCAATCATGGAACCTGCTGGGTCTGGAGGCCGACAGGTTCGATCCAATCGAGAACGCGCCTGAAGAATAG
PROTEIN sequence
Length: 124
AAHGDEGASHAVTYYAVVETSAQKLAWVSLKPVTGRTHQLRAHMAHIDHAIVGDPKYFNKENWQLPGGLQKRLHLLARRIVIPHPRGGFIDATAPLPPHMLQSWNLLGLEADRFDPIENAPEE*