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PLM3_60_coex_sep16_scaffold_20656_4

Organism: PLM3_60_coex_sep16_Alphaproteobacteria_Rhizobiales_61_7

near complete RP 44 / 55 MC: 5 BSCG 42 / 51 MC: 1 ASCG 7 / 38 MC: 1
Location: comp(2574..3032)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor Tax=Bradyrhizobium sp. S23321 RepID=I0GCP2_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 93.4
  • Coverage: 152.0
  • Bit_score: 273
  • Evalue 1.20e-70
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.1
  • Coverage: 152.0
  • Bit_score: 276
  • Evalue 1.10e-71
ECF sigma similarity KEGG
DB: KEGG
  • Identity: 93.4
  • Coverage: 152.0
  • Bit_score: 273
  • Evalue 3.30e-71

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Taxonomy

Bradyrhizobium sp. CCGE-LA001 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 459
ATGATACCTGCGCTGCGCCGCTATGCGCGCGCGCTCGCGCGCGATGCCGATGTCGCTGACGATCTGGTGCAGGACACGCTGGTGCGGGCGCTGCGTTCGGAACGGCTGTTTCTCGGCGGCGACGTCAGAAGCTGGCTCTACACCATCCTGACCAACCTCAACAAGAACAGGCGGCGGTCGCTGGCGCGGCGGCCGCAATTCGTGCCGCTGCTCGACAACAATCCCGATGCCAGCGGGACCGAAGCGGAAGGCCGCGATATCGCCCGCGCGCTGGCAACCCTGGTGGAAGAGCAGCGCGCGGTGCTGCTGCTGGTGATGCTGGAAGGATTGAGCTATCGCGAGGTCGCCGACATTCAGGGCGTGCCGATCGGGACCGTGATGTCCCGTCTCGCCCGCGCGCGCGCCCATGTGAAGGCCTCGCTTGAGGGCGAGCGCGCCGCGCTGCGACGGGTGAAATGA
PROTEIN sequence
Length: 153
MIPALRRYARALARDADVADDLVQDTLVRALRSERLFLGGDVRSWLYTILTNLNKNRRRSLARRPQFVPLLDNNPDASGTEAEGRDIARALATLVEEQRAVLLLVMLEGLSYREVADIQGVPIGTVMSRLARARAHVKASLEGERAALRRVK*