ggKbase home page

PLM3_60_coex_sep16_scaffold_21888_9

Organism: PLM3_60_coex_sep16_Alphaproteobacteria_Rhizobiales_61_7

near complete RP 44 / 55 MC: 5 BSCG 42 / 51 MC: 1 ASCG 7 / 38 MC: 1
Location: comp(4586..5206)

Top 3 Functional Annotations

Value Algorithm Source
MiaB-like tRNA modifying enzyme Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHJ4_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 79.1
  • Coverage: 206.0
  • Bit_score: 331
  • Evalue 3.80e-88
Bradyrhizobium elkanii strain UASWS1015 Contig165, whole genome shotgun sequence {ECO:0000313|EMBL:KIU51478.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.0
  • Coverage: 205.0
  • Bit_score: 335
  • Evalue 4.80e-89
MiaB-like tRNA modifying enzyme similarity KEGG
DB: KEGG
  • Identity: 79.1
  • Coverage: 206.0
  • Bit_score: 331
  • Evalue 1.10e-88

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bradyrhizobium elkanii → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 621
AAGCAGATCCTGCGGCACGTGCCCGAATTGAAACGATTGCGAATCTCGTCGATCGACCAGGTCGAGGTCGACAGAGATCTGCTCGACGTGATCGCCGATGATGAACGCCTGATGCCGCATCTGCATCTGTCGCTGCAGTCCGGCGACGATCTGATCCTGAAGCGGCTGAAGCGGCGGCATTCACGCGAGGATGCGGTTCAATTCTGCGCGCAGGTGCGGCGCTTAAGGCCGGACATCGCGTTCGGCGCCGATATCATCGCGGGCTTTCCGACCGAGTCGGAGGAAATGTTCGCGCGCTCGCAGGATTTGGTGGAAGCGTGCGGCCTGACCTTCCTGCACGTGTTTCCGTATTCACCCCGTCCGGGCACGCCGGCCGCTCGGATGCCGCAGGTGTCGGGCGAGGTGATCAAGCAACGCGCCAGGCGATTGCGGGCGACCGGAAAGGCCGCGCTGCAGCGGCGATTGGCTTCGGAGATCGGCGCGACGCGTCATGTTCTGATCGAGAGCGCTACGCAGGGCCGTACCGAACATTTCATGCCGGTGGCGATTGCGGGCGAAACGCCGGGAGCAGTACGGACGCTTGCGATCACCGGGAATGAAGGCACGCGGTTGACGGTGTGA
PROTEIN sequence
Length: 207
KQILRHVPELKRLRISSIDQVEVDRDLLDVIADDERLMPHLHLSLQSGDDLILKRLKRRHSREDAVQFCAQVRRLRPDIAFGADIIAGFPTESEEMFARSQDLVEACGLTFLHVFPYSPRPGTPAARMPQVSGEVIKQRARRLRATGKAALQRRLASEIGATRHVLIESATQGRTEHFMPVAIAGETPGAVRTLAITGNEGTRLTV*